DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and ddx24

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:XP_002933278.2 Gene:ddx24 / 100490359 XenbaseID:XB-GENE-983004 Length:794 Species:Xenopus tropicalis


Alignment Length:750 Identity:170/750 - (22%)
Similarity:284/750 - (37%) Gaps:237/750 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GRKSGDNSQKRPRQEINKSRLAATEAEIQDLKT-----KYAEIDATAIKKFAQFPLS-KKTQ--- 84
            |.:|.||.     :::.|.:.:      |.||:     |..:...|:::|.|..|.| ||::   
 Frog   121 GVQSEDNG-----EDVTKDQFS------QQLKSKKKREKRKKKKNTSVQKDAPAPHSVKKSKNWS 174

  Fly    85 ---------------------------KALAESKFVHPTQVQRDSIGPALQGK-DVLGAAITGSG 121
                                       |||:...|..||.:|..::..|::.| |:||||.||||
 Frog   175 ENALANTSSKNVDVSAWKNLYVPQVVLKALSYLGFACPTPIQALALPSAIRDKMDILGAAETGSG 239

  Fly   122 KTLAFLIPVLEHLFMNKWSRTDGVGA--------------------------------------- 147
            |||||.||::..:.  :|.:....||                                       
 Frog   240 KTLAFAIPMIHSIL--EWQKRQEYGAAEGETEEKPTTSDGKNEMDVAEKEEQDMSENEEDVEQVD 302

  Fly   148 ---------------------------------------IIISPTRELAYQIFETLKKVGKHHDF 173
                                                   ::::||||||.|:...:..|.|....
 Frog   303 DNVEPLSAACINVENIDINVNAVPSSKTGTWDKERPLLGLVVTPTRELAVQVKHHIDAVAKFTGI 367

  Fly   174 SAGLIIGGKNLKFERTRMD-QCNILICTPGRLLQHMDE-NP-LFNTSTMEMLVLDEADRCLDMGF 235
            ...:::||...:.::..:| :..|:|.|||||.:.:.| :| |.|...:..||:|||||.::.|.
 Frog   368 RTAIVVGGMAPQKQQRLLDRRPEIVIATPGRLWELIRERHPHLRNLRQLRCLVIDEADRMVEKGH 432

  Fly   236 QKTLNSIIE-----NFPPVRQTLLFSATQTNTVQDLARLNLKDPVY---------------VGYG 280
            ...|:.:.|     ::...|||.:||||.|...|...|| |:...|               :|. 
 Frog   433 YAELSQLFELLSEVHYNSKRQTFVFSATLTLIHQAPTRL-LQKKKYKKIDKDSKLVSLMEKIGM- 495

  Fly   281 GATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHLKQKIIVFVASCKQA 345
                :::|    |....|...|..|.|.::.:....|:|...|:.|:..: ..:.:||..|....
 Frog   496 ----KDKP----KVIDLTRKQATVETLTETRIHCATEEKDFYLYYFLLQY-PGRTMVFANSIDCI 551

  Fly   346 KYLYEIFCKL--RPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQ 408
            |.|..:...|  .|    |.::..:||.:|:...|.|..:...|:.:||||:||||.|.|..|:.
 Frog   552 KRLSSLLTILDCNP----LPMHANMHQKQRLKNLERFAERESCVLLTTDVAARGLDIPNVQHVIH 612

  Fly   409 LDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDPKKLFSPRV 473
            ...|.....|:||:||:||..:.|..||::.|::                   .|:.||:|....
 Frog   613 YQVPRTSETYVHRSGRTARASSDGLTLLLIGPND-------------------MINFKKIFRTLE 658

  Fly   474 KIEAFLAQFPELRATAQRAFLSYIKSVFLMRNKRLFNVFSLDLDAFAQSLGLAVTPRVPFLEKFL 538
            |.|    :.|:                        |.|.|..:....:.:.||  ..:..:|.|.
 Frog   659 KNE----ELPD------------------------FPVESKCMSGIKERVNLA--RMIEKMEYFN 693

  Fly   539 WRQKQLQQQKEQGDNAKSINPLLSKLTKQQSFGGGDEDEENSDDEDFIKVKRKD-HDVEGEPV-- 600
            .:.||.....:|...|..::     |......||...:||....:..:|:.:|. ..:..:|:  
 Frog   694 CKAKQQNSWLQQAAEALELD-----LDDDVLVGGQHNEEEERVKQKSLKIMKKQLKQLLSQPIFR 753

  Fly   601 -KLDEEDDTE-----------NEAEAPLVVPKREK 623
             .|..:..|:           |::|:.|:...::|
 Frog   754 NSLKTKYPTQTGKLVLPSLLANQSESALLTISKQK 788

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 142/581 (24%)
DEADc 74..277 CDD:238167 79/335 (24%)
HELICc 311..437 CDD:238034 39/127 (31%)
DUF4217 474..530 CDD:290667 8/55 (15%)
ddx24XP_002933278.2 DEADc_DDX24 200..503 CDD:350704 77/314 (25%)
SF2_C_DEAD 514..642 CDD:350174 41/132 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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