DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and ddx51

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:XP_002931939.2 Gene:ddx51 / 100135117 XenbaseID:XB-GENE-5837731 Length:659 Species:Xenopus tropicalis


Alignment Length:613 Identity:140/613 - (22%)
Similarity:222/613 - (36%) Gaps:196/613 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QRQKPKGPGKP------GSRFKPG-SGTFKGAGGGRKSGDNSQKRPRQEINKSRLAATEAEIQDL 59
            |||.||....|      .:..||. :.|.      ||:....:|:..:|..:.:..:.|.| || 
 Frog    38 QRQHPKAKASPKDDHVEETNTKPSINETL------RKTKKRKKKQEEEEEGELKSPSDENE-QD- 94

  Fly    60 KTKYAEIDATAIKKFAQFPLSKKTQKALAES---------------------------------- 90
               ..:.:||.||:..|   :||.:|.:||.                                  
 Frog    95 ---SGQQEATCIKEKKQ---TKKKKKLIAEECNEVIEHISKNNEGSMAEEPGGAKVTSSDPSSIL 153

  Fly    91 --------------------------------------------------------KFVHPTQVQ 99
                                                                    |::.|.|.:
 Frog   154 LGGFEPKSVEKVLPVLPQWLAQPSLVQKNIKQNLVPIHDIHCLHPKVLKKLEANKVKYLFPVQAE 218

  Fly   100 RDSIGPA---------LQGK------DVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGVGAII 149
               :.||         |.||      ||..:|.|||||||||:||:::.|.......   |.|::
 Frog   219 ---VIPAILDSTCHGFLLGKGGYRPSDVCVSAPTGSGKTLAFVIPIVQALLQRVVCE---VRALV 277

  Fly   150 ISPTRELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFE------RTRMDQC---NILICTPGRLL 205
            :.||:|||.|:.:..............::.|.|:...|      :|....|   :||:||||||:
 Frog   278 VLPTKELAQQVCKVFNTYVDGMGLKVVMVTGQKSFLKEQESLIHKTAFGFCSLADILVCTPGRLV 342

  Fly   206 QHMDENPLFNTSTMEMLVLDEADRCLDMGFQ-------KTLNSIIENFP---------------- 247
            .|:.:...||...:..||:|||||.:|...|       |.:..::.:.|                
 Frog   343 DHIQQTEGFNLRHLRFLVIDEADRMIDSMNQDWLSHVTKAVFQVVADSPNMLFTRKEPGILTAAS 407

  Fly   248 ------PVRQTLLFSATQTNTVQDLARLNLKDPVYVGYGGATPREEPSASTKKTPNTAVLAVPEL 306
                  |: |.||||||.|...:.|.:|.|..|...........::.|.:..::..:...::||.
 Frog   408 SCLPQTPL-QKLLFSATLTQNPEKLKQLGLYQPRLFTSKQKGTSDDSSETQMESSTSGNFSLPEG 471

  Fly   307 LQQSYVVLNLEDKITMLWSFIKNHLKQKIIVFVASCKQAKYLY------------EIFCKLRPGS 359
            |...|:..||..|..:|..|:.:....:::.|..|...:..||            |...:|.|| 
 Frog   472 LTHYYIPCNLNSKPLILLHFLLSLRFSRVLCFTNSRDASHRLYLLVRSFGGISVAEFSSRLSPG- 535

  Fly   360 PLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGR 424
                        .|....::|.:....::.|||..:||:|...|..|:..|.|:.:..|:||.||
 Frog   536 ------------ERKKTLKEFEQGKVQLLISTDATARGIDIKGVKCVINYDAPQFIRTYVHRVGR 588

  Fly   425 SARNKTRGECLLVLTPSEEEYMISALKE 452
            :||....|....:|...:|....|.|::
 Frog   589 TARAGKAGLAFTMLLKVQENPYFSMLRD 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 140/613 (23%)
DEADc 74..277 CDD:238167 77/345 (22%)
HELICc 311..437 CDD:238034 34/137 (25%)
DUF4217 474..530 CDD:290667
ddx51XP_002931939.2 DEADc_DDX51 200..443 CDD:350714 71/249 (29%)
SF2_C_DEAD 472..602 CDD:350174 35/142 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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