DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8289 and cbx8

DIOPT Version :10

Sequence 1:NP_573229.1 Gene:CG8289 / 32741 FlyBaseID:FBgn0030854 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001072443.1 Gene:cbx8 / 779897 XenbaseID:XB-GENE-977527 Length:362 Species:Xenopus tropicalis


Alignment Length:135 Identity:28/135 - (20%)
Similarity:48/135 - (35%) Gaps:29/135 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 EKQWEVEKILDHVATKEGDMFKIRWKKYGPKDDSWEPSKNLACDALI------------------ 276
            |:.:..|.:|.....|....:.::||.:..|..:|||.:|:....|:                  
 Frog     8 ERVFAAESLLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENILDARLVAAFEDREREREMYGPKKR 72

  Fly   277 ----EKFMRKQATQENVDVKELRESPKKTERLVDECYPRTNLHNR-------IERSSKRSSAKNR 330
                :.|:.|...:.|....|.|....:..|:....:|...|.:|       |..||:.|||...
 Frog    73 GPKPKTFLLKAQAKANAKTYEFRSESTRGVRIPYPGHPPQELPSRSREGLRSIPTSSQGSSATRG 137

  Fly   331 IFYGE 335
            ..:.|
 Frog   138 DIFSE 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8289NP_573229.1 CD_CSD 233..281 CDD:349274 12/69 (17%)
cbx8NP_001072443.1 CD_Cbx6 8..65 CDD:349295 12/56 (21%)
CBX7_C <332..354 CDD:465385
Blue background indicates that the domain is not in the aligned region.

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