DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8289 and cbx3a

DIOPT Version :9

Sequence 1:NP_573229.1 Gene:CG8289 / 32741 FlyBaseID:FBgn0030854 Length:336 Species:Drosophila melanogaster
Sequence 2:XP_005173826.1 Gene:cbx3a / 751689 ZFINID:ZDB-GENE-030131-1158 Length:177 Species:Danio rerio


Alignment Length:120 Identity:34/120 - (28%)
Similarity:55/120 - (45%) Gaps:14/120 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 GRRNAGTKKADDSIDPEKQWEVEKILDHVATKEGDMFKIRWKKYGPKDDSWEPSKNLACDALIEK 278
            |::.||..|.:  :...:::.|||::|.........|.::||.:...|::|||.:||.|..||..
Zfish     5 GKKQAGKSKKE--VQEIEEFVVEKVMDQRVVNGKVEFFLKWKGFTDADNTWEPEENLDCPELIAA 67

  Fly   279 FMRKQATQENVDVKELRESPKKTERLVDECYPRT---NLHNRIERSSK-RSSAKN 329
            |:..|        |.:.|.|:..:|......|.|   ....:.|.|.| |..|:|
Zfish    68 FLESQ--------KGVVEKPEAVKRKSSTDEPETEESKAKRKKEMSDKPRGFARN 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8289NP_573229.1 CHROMO 233..284 CDD:214605 17/50 (34%)
cbx3aXP_005173826.1 Chromo 23..71 CDD:278797 17/47 (36%)
Chromo_shadow 116..167 CDD:279701
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 1 1.000 - - FOG0000191
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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