DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8289 and cbx1

DIOPT Version :9

Sequence 1:NP_573229.1 Gene:CG8289 / 32741 FlyBaseID:FBgn0030854 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001017150.1 Gene:cbx1 / 549904 XenbaseID:XB-GENE-1005974 Length:184 Species:Xenopus tropicalis


Alignment Length:106 Identity:31/106 - (29%)
Similarity:54/106 - (50%) Gaps:18/106 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 KKADDSID-PEKQWEVEKILDHVATKEGDMFKIRWKKYGPKDDSWEPSKNLACDALIEKFMR--- 281
            ||.::.:| .|:::.|||:||....|....:.::||.:...|::|||.:||.|..||.:|::   
 Frog     8 KKMEEVVDEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDDDNTWEPEENLDCPDLIAEFLQSQK 72

  Fly   282 -----------KQATQENVDVKELRESPKKTERLVDECYPR 311
                       |:....:.:|.| ...|||.:..|::  ||
 Frog    73 SAYESEKTEAGKRKADSDTEVGE-ESKPKKKKDEVEK--PR 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8289NP_573229.1 CHROMO 233..284 CDD:214605 19/64 (30%)
cbx1NP_001017150.1 CD_HP1beta_Cbx1 20..69 CDD:349297 18/48 (38%)
CD_CSD 111..168 CDD:391946 31/106 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 1 1.000 - - FOG0000191
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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