DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8289 and cbx1b

DIOPT Version :9

Sequence 1:NP_573229.1 Gene:CG8289 / 32741 FlyBaseID:FBgn0030854 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001002090.1 Gene:cbx1b / 415180 ZFINID:ZDB-GENE-040625-68 Length:203 Species:Danio rerio


Alignment Length:139 Identity:36/139 - (25%)
Similarity:67/139 - (48%) Gaps:27/139 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 SESDVDAGTEDE--KSAQPQKVAAKSKSSPNAKKAKGRGRRNAGTKKADDSI-DPEKQWEVEKIL 239
            ||...||...:.  ..::|:::.|..|.:               .||.::.: :.|:::.|||:|
Zfish     5 SEPSADAAVTEAPVSQSEPKQITAGKKQN---------------KKKVEEVVEEEEEEYVVEKVL 54

  Fly   240 DHVATKEGDMFKIRWKKYGPKDDSWEPSKNLACDALIEKFMRKQATQE---------NVDVKELR 295
            |....|....:.::||.:..:|::|||.:||.|..||.:|::.|.|.|         :.|.||.:
Zfish    55 DRRVVKGKVEYLLKWKGFSDEDNTWEPDENLDCPDLIAEFLQSQKTAESGGKRRAETDGDGKETK 119

  Fly   296 ESPKKTERL 304
            :...:.|:|
Zfish   120 KRKDEPEKL 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8289NP_573229.1 CHROMO 233..284 CDD:214605 18/50 (36%)
cbx1bNP_001002090.1 Chromo 54..97 CDD:278797 15/42 (36%)
Chromo_shadow 136..187 CDD:279701
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1911
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 1 1.000 - - FOG0000191
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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