DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8289 and HP1D3csd

DIOPT Version :10

Sequence 1:NP_573229.1 Gene:CG8289 / 32741 FlyBaseID:FBgn0030854 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_573358.1 Gene:HP1D3csd / 32906 FlyBaseID:FBgn0030994 Length:179 Species:Drosophila melanogaster


Alignment Length:137 Identity:29/137 - (21%)
Similarity:56/137 - (40%) Gaps:20/137 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ASKKVAESKRRNG--VANESENEEIDQQKSNGTGRSSRKTPNKRKAKLTVASDSEDSDCQTSTSN 66
            |.|:.:.:.:..|  .|.|.:.:|.||||.|     .::..|.::.::......::|....||..
  Fly     2 ADKENSPNNKNTGGFPAEEEKQKENDQQKEN-----DQQKENDQQEEVQEEPTKDESKEAGSTPP 61

  Fly    67 VDVPAARNKRKVGKARNATTSPRKNGKKIVIEDSDDDA-NHSDVDPSAD---SSPRKP-NIKRQT 126
            .......|..:...||...        :::::.::.|| |...|..:.|   |:..:| |:....
  Fly    62 PKHMGVHNSARAELARLLV--------ELLVQQAELDATNGGSVSGNLDGGNSNESQPLNVPPTD 118

  Fly   127 RRSVRGE 133
            ...|||:
  Fly   119 ALLVRGK 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8289NP_573229.1 CD_CSD 233..281 CDD:349274
HP1D3csdNP_573358.1 None
Blue background indicates that the domain is not in the aligned region.

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