DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8289 and chp2

DIOPT Version :10

Sequence 1:NP_573229.1 Gene:CG8289 / 32741 FlyBaseID:FBgn0030854 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_596808.1 Gene:chp2 / 2540047 PomBaseID:SPBC16C6.10 Length:380 Species:Schizosaccharomyces pombe


Alignment Length:271 Identity:65/271 - (23%)
Similarity:112/271 - (41%) Gaps:52/271 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 IEDSDDDANHSDVDPSADSSPRK----PNIKRQTRRSVRGETEDSNELP------STSKASAHAS 151
            :|::::..|:.....|.: ||:.    |::   ...||..:|...|.|.      |.|:.:.:.|
pombe    28 VEEAENSINNKSSTASLE-SPQNGSWHPSL---YGLSVPEKTHIQNSLDLYSHGNSGSQKTHNVS 88

  Fly   152 SPIKKRKLSRASTSSVKNGKKVAEKDSESDVDAGTEDEKSAQPQKVAAKSKS--SPNAKKAKGRG 214
            ...:.||:..:..|.:.|     .:|||   |...|||.|:...:..:.|.:  |.|.:|..|..
pombe    89 FSCEIRKVKSSKLSPISN-----MEDSE---DKKEEDESSSYKNEFKSSSSASVSSNFEKTSGSD 145

  Fly   215 RRN--------------AGTKKADDSIDPEKQWEVEKILDHVATKEGDMFK--IRWKKY-GPKDD 262
            ..|              |.:...|.:.|.|  :.||.|||....|:|..|:  ::|:.| .|.|:
pombe   146 DHNSQSPVPLNEGFEYIASSGSEDKNSDEE--FAVEMILDSRMKKDGSGFQYYLKWEGYDDPSDN 208

  Fly   263 SWEPSKNLA-CDALIEKFMRKQATQENVDVKELRESPKKTERLVDECY-----PRTNLHNRIERS 321
            :|...::.| |..||:.:...:..:.  |:..|....:...|..:|..     ..:|..:.|...
pombe   209 TWNDEEDCAGCLELIDAYWESRGGKP--DLSSLIRLTRSRARSSNEASYVEKDESSNSDDSISYK 271

  Fly   322 SKRS-SAKNRI 331
            .:|| :|.|||
pombe   272 RRRSRNAANRI 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8289NP_573229.1 CD_CSD 233..281 CDD:349274 17/51 (33%)
chp2NP_596808.1 CD_Swi6_like 175..228 CDD:349287 18/54 (33%)
ChSh 316..380 CDD:197638
Blue background indicates that the domain is not in the aligned region.

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