DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8289 and cec-5

DIOPT Version :10

Sequence 1:NP_573229.1 Gene:CG8289 / 32741 FlyBaseID:FBgn0030854 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001370694.1 Gene:cec-5 / 177537 WormBaseID:WBGene00017993 Length:374 Species:Caenorhabditis elegans


Alignment Length:237 Identity:54/237 - (22%)
Similarity:96/237 - (40%) Gaps:72/237 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KASKKVAESKRRNGVANESENEEIDQQKSNGTGRSSRKTPNKRKAKLTVASDSEDSDCQTSTSNV 67
            |:.||.|:||..:. ::|.|.||:.::....:.:|:::          .|||.::.         
 Worm   187 KSPKKSAKSKDDDS-SDEEEEEEVKEKSPKKSSKSTKR----------AASDDDEE--------- 231

  Fly    68 DVPAARNKRKVGKARNATT-------------SPRKNGKKIVIEDSDDDANHSDVDPSADSSPRK 119
            :.|.|..|.|  |::.|.|             :|:|..|....|..:::   .:|:.....:|:|
 Worm   232 EEPVATKKSK--KSKRAETPEEEDDEEEEVVKTPKKTKKSKRAETPEEE---DEVEEEVVKTPKK 291

  Fly   120 PNIKRQTRRSVRGET--------EDSNELPSTSKASAHASSPIKKRKLSRASTSSVKNGKKVAEK 176
            ....:..::|.|.||        ||..|.|.:||         |:.|        .|:.|:||| 
 Worm   292 SKSSKSPKKSKRAETSDEEDEDEEDEKEAPKSSK---------KQEK--------AKSSKRVAE- 338

  Fly   177 DSESDVDAGTEDEKSAQPQKVAAKSKSSPNAKKAKGRGRRNA 218
                  |:|.|:|.  |.....:.|:.....::|...|:|.:
 Worm   339 ------DSGNEEED--QDNTSGSGSEGEEEEEEASSNGKRKS 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8289NP_573229.1 CD_CSD 233..281 CDD:349274
cec-5NP_001370694.1 CD_CSD 115..167 CDD:475127
Blue background indicates that the domain is not in the aligned region.

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