DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8289 and cec-4

DIOPT Version :10

Sequence 1:NP_573229.1 Gene:CG8289 / 32741 FlyBaseID:FBgn0030854 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_501231.1 Gene:cec-4 / 177536 WormBaseID:WBGene00017990 Length:270 Species:Caenorhabditis elegans


Alignment Length:237 Identity:54/237 - (22%)
Similarity:88/237 - (37%) Gaps:80/237 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 SKASAHASSPIKKRKLSRASTSSVKN--------GKKVAEK---DSESDVDAG-----TE-DEKS 191
            :|.:........|...::..||  ||        |.||.|:   :.|.::.:|     || |.|.
 Worm     2 AKKTVEGEHGTPKTNFTKKETS--KNHDDFKKIIGHKVVEEHYVEYEVELTSGKTITATEFDFKG 64

  Fly   192 AQPQKVAAKSKSSPNAKKAKGRGRRNAGTKKADDSIDPEKQWEVEKILDHVATKEGDMFKIRWKK 256
            ..       |..|...||.         ||::|||   ..::.||::|.|...|...::.::||.
 Worm    65 DD-------SLLSTYKKKV---------TKQSDDS---SGEYAVERVLAHRKVKGSPLYLVQWKG 110

  Fly   257 YGP----KDDSWEPSKNLACDAL--------------------------IEKFMRKQATQENVDV 291
            | |    ..:.||...:...|.|                          ..|.::::|...:.|.
 Worm   111 Y-PHPVWNSEMWEEDLDNCKDLLAAYKKHQEDLKIAQTPKKTPSKTPKKTPKSLKRRALTPSDDE 174

  Fly   292 KE---LRESPKK-----TERLVDECYPRTNLHNRIERSSKRS 325
            :|   :...|||     |::|.....|.|||   :|:|.|::
 Worm   175 EEAGPIAPEPKKTPKQSTKKLKRTTSPETNL---VEKSKKKA 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8289NP_573229.1 CD_CSD 233..281 CDD:349274 14/77 (18%)
cec-4NP_501231.1 CD_CEC-4_like 87..137 CDD:349317 13/50 (26%)

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