DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8289 and cbx2

DIOPT Version :9

Sequence 1:NP_573229.1 Gene:CG8289 / 32741 FlyBaseID:FBgn0030854 Length:336 Species:Drosophila melanogaster
Sequence 2:XP_002942815.2 Gene:cbx2 / 100491304 XenbaseID:XB-GENE-970247 Length:477 Species:Xenopus tropicalis


Alignment Length:393 Identity:74/393 - (18%)
Similarity:128/393 - (32%) Gaps:118/393 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AKASKKVAESKRRNGVANESENEEIDQQKSNGTGRSSRKTPNKRKAKLTVA-------------- 52
            :.:|...:.|...:..::.|::.:.|.|:.|...|.|...|.| ||...:|              
 Frog    96 SSSSSSSSSSSSSSSSSSSSDDSDADTQQRNPRPRDSHPVPQK-KAPAVLARPELKEPVRKKRGR 159

  Fly    53 -----------------------------SDSEDSDCQTSTSNVDVPAARNKRKVGK-------- 80
                                         ..|........|.:.|:.::.|.|..|.        
 Frog   160 KPLPPEQKLPRRAKGAKPGPKGSLNKLQPGHSVQGFQALKTHSKDMQSSSNNRPGGLSAELLSSI 224

  Fly    81 ARNATTSPRKNGKKIVIEDSDDDANHSDVDPSADSSPRKP-----NIKRQTRRS-----VRGETE 135
            |:|:.:.|..:..:.:...|......:.::.::....|||     |.||....|     .|||.|
 Frog   225 AKNSPSQPNGSSPRSLSWQSSIVHYMNRINQNSSQPGRKPAGSTFNAKRSCLDSKSLFKPRGEVE 289

  Fly   136 DSNELPSTSKASAHASSPIKKRKLSRASTSSVKNGKKVAEKDSESDVDAGTEDEKSAQPQKVAA- 199
            .|..:|.|||  .|.|.       .:..:.:|::...||...:|:.........|:...:.||| 
 Frog   290 ISPAMPKTSK--VHESE-------EQTHSHTVQSTPPVAAGSNENPSHTAPVQTKTQGMRAVAAS 345

  Fly   200 -------KSKSSPN------------AKKAKGRGRRNAGTKK-----ADDSIDP-EKQWEVEKI- 238
                   ||..||:            :||....|....||.:     |.:...| |.|.|:..: 
 Frog   346 PAGQNTQKSNGSPSVGVATSCKADKISKKTGVVGPARLGTTEPQVHPATERAQPTEGQRELADLS 410

  Fly   239 --------LDHVATKEGDMFKIRWKKYGPKDDSWEPSKNLACDALIEKFMRKQATQENVDVKELR 295
                    .||.::.......::      ....|:|::     :|:|.......|...:.| .::
 Frog   411 TGDDSSLDSDHDSSLSSQDMAVQ------ASQDWKPAR-----SLLEHVFVTDVTANLITV-TVK 463

  Fly   296 ESP 298
            |||
 Frog   464 ESP 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8289NP_573229.1 CHROMO 233..284 CDD:214605 7/59 (12%)
cbx2XP_002942815.2 CD_Cbx2 9..61 CDD:349294
CBX7_C 436..468 CDD:407338 9/37 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1628171at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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