DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-24 and Ndufv2

DIOPT Version :9

Sequence 1:NP_001285378.1 Gene:ND-24 / 32740 FlyBaseID:FBgn0030853 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_082664.1 Gene:Ndufv2 / 72900 MGIID:1920150 Length:248 Species:Mus musculus


Alignment Length:244 Identity:158/244 - (64%)
Similarity:191/244 - (78%) Gaps:13/244 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 AVRANIRAIATSSARASDN-------------LFVHRDTPEDNPNIPFEFTAENKKRVEAILSIY 63
            |:||....:|....|.:.|             |||||||||:||:.||:||.||.||:|||:..|
Mouse     5 ALRARATGLAAQWGRHARNLHKTAVHNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNY 69

  Fly    64 PEGHKRGAMIPLLDLAQRQYGWLPISAMHKVAEILQLPNMRVYEVATFYTMFMRKPTGKYHIQVC 128
            ||||:..|::|:|||||||.||||||||:||||:||:|.||||||||||||:.|||.||||||||
Mouse    70 PEGHQAAAVLPVLDLAQRQNGWLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVC 134

  Fly   129 TTTPCWLRGSDDILETCKKQLGIGVGDTTKDRKFTISEVECLGACVNAPMVAINDDYYEDLTSKD 193
            |||||.||.||.||||.:::|||.||:||.|:.||:.||||||||||||||.|||:||||||.||
Mouse   135 TTTPCMLRDSDSILETLQRKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQINDNYYEDLTPKD 199

  Fly   194 MQDILNDLKADKISPPGPRNGRFASEPKGEPTSLSEEPKGPGFGLQAGL 242
            :::|:::|||.|:..||||:|||..||.|..|||:|.|||||||:||||
Mouse   200 IEEIIDELKAGKVPKPGPRSGRFCCEPAGGLTSLTEPPKGPGFGVQAGL 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-24NP_001285378.1 2Fe-2S_thioredx 56..202 CDD:396008 104/145 (72%)
Ndufv2NP_082664.1 2Fe-2S_thioredx 62..208 CDD:396008 104/145 (72%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 229..248 13/18 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837133
Domainoid 1 1.000 227 1.000 Domainoid score I2502
eggNOG 1 0.900 - - E1_COG1905
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10884
Inparanoid 1 1.050 326 1.000 Inparanoid score I2464
Isobase 1 0.950 - 0 Normalized mean entropy S1990
OMA 1 1.010 - - QHG54082
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004458
OrthoInspector 1 1.000 - - oto93807
orthoMCL 1 0.900 - - OOG6_101311
Panther 1 1.100 - - LDO PTHR10371
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R804
SonicParanoid 1 1.000 - - X3749
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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