DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HRH2 and mAChR-C

DIOPT Version :10

Sequence 1:NP_001354640.1 Gene:HRH2 / 3274 HGNCID:5183 Length:422 Species:Homo sapiens
Sequence 2:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster


Alignment Length:327 Identity:93/327 - (28%)
Similarity:158/327 - (48%) Gaps:36/327 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    19 ITITVVLAVLILITVAGNVVVCLAVGLNRRLRN-LTNCFIVSLAITDLLLGLLVLPFSAIYQLSC 82
            :.|...|.||||   .||::..:||...|.||: ::|.||:|||::|..:| |.||:..::.:..
  Fly    54 LAINAFLFVLIL---GGNILTIVAVRTCRHLRSVISNLFILSLAVSDFCVG-LALPYHLVFYMGS 114

Human    83 KWSFGKVFCNIYTSLDVMLCTASILNLFMISLDRYCAVMDPLRYPVLVTPVRVAISLVLI-WVIS 146
            .....:..|.:...|.:..|..|:|.|..|::|||.||:..|.|...:|. |||.|:::. |.:.
  Fly   115 DIGAMRGPCLLRFFLLICACCVSMLTLISIAVDRYIAVVYALHYRRYMTR-RVAYSIIIFNWCLG 178

Human   147 ITLSFLSIHLGWNSRNETSKGNHTTSKCKVQVNEVYGLVDGLVT--FYLPLLIMCITYYRIFKVA 209
            ..::.|.:.  ||...:       ...|:.......|.:.|::|  |.:..:.|.:.|:||.:.|
  Fly   179 ALVALLPVF--WNRWPD-------AQACEFDEVLAPGYIAGVITPGFVIIWICMFLVYWRIMREA 234

Human   210 RDQAKRINH---ISSWKAATIR------EHKATVTLAAVMGAFIICWFPYFTAFVYRGLRGDDAI 265
            ..||.|:..   .::.:|.|:|      :.|:...:..:||.|.:||.|||...:.: |......
  Fly   235 SKQALRLRQSVVYNTDEATTMRNLLLHPDWKSVQIVVFIMGCFTLCWLPYFCVAIAQ-LFSICQS 298

Human   266 NEVLEAIVLWLGYANSALNPILYAALNRDFRTGYQQLFCCRLANR--------NSHKTSLRSNAS 322
            :.::......|..||||||||:|:..|..||..:.|..|||.|.:        :.|:....|::.
  Fly   299 SSMIYKTTFSLAIANSALNPIIYSWKNSGFRRAFVQTLCCRTARQCEDQLPADSKHRMEATSSSQ 363

Human   323 QL 324
            ::
  Fly   364 EI 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HRH2NP_001354640.1 7tmA_Histamine_H2R 19..299 CDD:320179 86/292 (29%)
TM helix 1 20..46 CDD:320179 10/25 (40%)
TM helix 2 53..80 CDD:320179 11/26 (42%)
TM helix 3 91..121 CDD:320179 11/29 (38%)
TM helix 4 133..153 CDD:320179 5/20 (25%)
TM helix 5 179..209 CDD:320179 8/31 (26%)
TM helix 6 227..257 CDD:320179 10/35 (29%)
TM helix 7 267..292 CDD:320179 10/24 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 316..340 1/9 (11%)
mAChR-CNP_572358.1 7tm_classA_rhodopsin-like 53..325 CDD:410626 83/285 (29%)
TM helix 1 53..78 CDD:410626 10/26 (38%)
TM helix 2 86..111 CDD:410626 11/25 (44%)
TM helix 3 123..153 CDD:410626 11/29 (38%)
TM helix 4 166..185 CDD:410626 4/18 (22%)
TM helix 5 204..229 CDD:410626 6/24 (25%)
TM helix 6 261..291 CDD:410626 9/29 (31%)
TM helix 7 300..325 CDD:410626 10/24 (42%)

Return to query results.
Submit another query.