DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HRH2 and Hrh2

DIOPT Version :9

Sequence 1:NP_001354640.1 Gene:HRH2 / 3274 HGNCID:5183 Length:422 Species:Homo sapiens
Sequence 2:XP_008769708.1 Gene:Hrh2 / 25461 RGDID:2831 Length:413 Species:Rattus norvegicus


Alignment Length:418 Identity:324/418 - (77%)
Similarity:343/418 - (82%) Gaps:23/418 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAPNGTASSFCLDSTACKITITVVLAVLILITVAGNVVVCLAVGLNRRLRNLTNCFIVSLAITDL 65
            |.||||..|.||||.|.|:||:|||..|||||:||||||||||.||||||:||||||||||.|||
  Rat     1 MEPNGTVHSCCLDSMALKVTISVVLTTLILITIAGNVVVCLAVSLNRRLRSLTNCFIVSLAATDL 65

Human    66 LLGLLVLPFSAIYQLSCKWSFGKVFCNIYTSLDVMLCTASILNLFMISLDRYCAVMDPLRYPVLV 130
            ||||||||||||||||.|||||.||||||||||||||||||||||||||||||||.|||||||||
  Rat    66 LLGLLVLPFSAIYQLSFKWSFGHVFCNIYTSLDVMLCTASILNLFMISLDRYCAVTDPLRYPVLV 130

Human   131 TPVRVAISLVLIWVISITLSFLSIHLGWNSRNETSKGNHTTSKCKVQVNEVYGLVDGLVTFYLPL 195
            ||||||||||.|||||||||||||||||||||.| :|.:.|.|||||||||||||||||||||||
  Rat   131 TPVRVAISLVFIWVISITLSFLSIHLGWNSRNGT-RGGNDTFKCKVQVNEVYGLVDGLVTFYLPL 194

Human   196 LIMCITYYRIFKVARDQAKRINHISSWKAATIREHKATVTLAAVMGAFIICWFPYFTAFVYRGLR 260
            ||||:|||||||:||:|||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   195 LIMCVTYYRIFKIAREQAKRINHISSWKAATIREHKATVTLAAVMGAFIICWFPYFTAFVYRGLR 259

Human   261 GDDAINEVLEAIVLWLGYANSALNPILYAALNRDFRTGYQQLFCCRLANRNSHKTSLRSNASQLS 325
            |||||||.:|.||||||||||||||||||||||||||.|||||.|:.|:.||||||||.|.|.|.
  Rat   260 GDDAINEAVEGIVLWLGYANSALNPILYAALNRDFRTAYQQLFHCKFASHNSHKTSLRLNNSLLP 324

Human   326 RTQSREPRQQEEKPLKLQVWSGTEVTAPQGATDR---KPALSCTTCSSNLLSCCKSLWGLRFLQR 387
            |:||||.|.|||||||||||||||:|.|||...|   .|.||....|.:   |....|       
  Rat   325 RSQSREGRWQEEKPLKLQVWSGTELTHPQGNPIRLCLSPGLSLRQASRH---CLPRTW------- 379

Human   388 HMGGPSEELSGEP---LSEEPQKRPPQK 412
                  ||:.|.|   ||...:|..|::
  Rat   380 ------EEMKGPPTCQLSPLGKKTSPRE 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HRH2NP_001354640.1 7tmA_Histamine_H2R 19..299 CDD:320179 254/279 (91%)
TM helix 1 21..45 CDD:320179 19/23 (83%)
TM helix 2 54..76 CDD:320179 20/21 (95%)
TM helix 3 92..114 CDD:320179 21/21 (100%)
TM helix 4 137..153 CDD:320179 14/15 (93%)
TM helix 5 180..203 CDD:320179 21/22 (95%)
TM helix 6 233..255 CDD:320179 21/21 (100%)
TM helix 7 267..292 CDD:320179 21/24 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 316..340 16/23 (70%)
Hrh2XP_008769708.1 7tm_4 29..302 CDD:304433 251/273 (92%)
7tm_1 35..287 CDD:278431 232/252 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 467 1.000 Domainoid score I8352
eggNOG 00.000 Not matched by this tool.
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40613
Inparanoid 1 1.050 611 1.000 Inparanoid score I10022
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG48050
OrthoDB 1 1.010 - - D119618at9347
OrthoFinder 1 1.000 - - FOG0011525
OrthoInspector 1 1.000 - - oto134729
orthoMCL 1 0.900 - - OOG6_113611
Panther 1 1.100 - - LDO PTHR24247
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4088
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1515.480

Return to query results.
Submit another query.