DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment stas and Tmem41a

DIOPT Version :9

Sequence 1:	NP_573225.1	Gene:	stas / 32737	FlyBaseID:	FBgn0030850	Length:	320	Species:	Drosophila melanogaster
Sequence 2:	NP_001094275.1	Gene:	Tmem41a / 681708	RGDID:	1591692	Length:	264	Species:	Rattus norvegicus

Alignment Length:	239	Identity:	85/239 - (35%)
Similarity:	139/239 - (58%)	Gaps:	3/239 - (1%)

- Green bases have known domain annotations that are detailed below.

  Fly    82 LVIVAGIFVASLVTMCYVYAIFPELNAS---EKQHLKIPRDIQDAKMLAKVLDRYKDMYYFEVMF 143
            |::|.|....:|..:.....:.|.|.::   |.:.|..|.|:.:.:.||:||..|:..:...|:.
  Rat     7 LLLVFGGCTFALYLLSTRLPLGPRLGSAGEPEGRSLWFPSDLAELRELAEVLREYRKEHQAYVIL 71

  Fly   144 GVVVAYVFLQTFAIPGSLFLSILLGFLYKFPIALFLICFCSALGATLCYTLSNLVGRRLIRHFWP 208
            ....||::.|.||||||.||::|.|.|:...:.|.|.|..:::|||.||.||::.|::|:..::|
  Rat    72 LFCSAYLYKQGFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATGCYLLSSVFGKQLVVSYFP 136

  Fly   209 KKTSEWSKHVEEYRDSLFNYMLFLRMTPILPNWFINLASPVIGVPLHIFALGTFCGVAPPSVIAI 273
            .|.:...:.|||.|:.||.::||||:.|:.||||:||::|::.:|:..|......|:.|.:.|.:
  Rat   137 DKVALLQRKVEENRNGLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFSVLIGLIPYNFICV 201

  Fly   274 QAGKTLQKMTSSSEAFSWTSMGILMACACASLLPGLLKNKFKHK 317
            |.|..|..:||....|||.::..|:|.|..:|:||.|..||..|
  Rat   202 QTGSILSTLTSLDALFSWETVLKLLAIAMVALVPGTLIKKFSQK 245

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
stas	NP_573225.1	SNARE_assoc	157..276	CDD:286425	47/118 (40%)
Tmem41a	NP_001094275.1	SNARE_assoc	85..205	CDD:286425	47/119 (39%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0398
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1222755at2759
OrthoFinder	1	1.000	-	-		FOG0001464
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.820