DRSC/TRiP Functional Genomics Resources

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Protein Alignment stas and tmem41b

DIOPT Version :9

Sequence 1:NP_573225.1 Gene:stas / 32737 FlyBaseID:FBgn0030850 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_001073456.1 Gene:tmem41b / 561208 ZFINID:ZDB-GENE-061215-138 Length:282 Species:Danio rerio


Alignment Length:265 Identity:126/265 - (47%)
Similarity:181/265 - (68%) Gaps:0/265 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 QQQQQQQQATPQKQAMSADEKKATKKSLVIVAGIFVASLVTMCYVYAIFPELNASEKQHLKIPRD 119
            :|:.:..:.||..:...:....:.:.|::::..||..|...|..|:..||:|:..|::.:|||:|
Zfish    18 EQEPRPSKETPVPKGAQSPGGASARMSILLLVVIFACSACVMYLVFRNFPQLSEDEREKIKIPKD 82

  Fly   120 IQDAKMLAKVLDRYKDMYYFEVMFGVVVAYVFLQTFAIPGSLFLSILLGFLYKFPIALFLICFCS 184
            ::|||.|..||.:|||.||.:|:......|:||||||||||:|||||.|:||.||:||||:|.||
Zfish    83 MEDAKALGTVLSKYKDTYYTQVLLAYFATYIFLQTFAIPGSIFLSILSGYLYPFPLALFLVCLCS 147

  Fly   185 ALGATLCYTLSNLVGRRLIRHFWPKKTSEWSKHVEEYRDSLFNYMLFLRMTPILPNWFINLASPV 249
            .|||:.||.||.||||.::..:..::..:||:.|:::|:.|.||::|||:||.|||||||:.|||
Zfish   148 GLGASFCYMLSYLVGRPMVYKYLTERAQKWSQQVDKHREHLINYIIFLRITPFLPNWFINITSPV 212

  Fly   250 IGVPLHIFALGTFCGVAPPSVIAIQAGKTLQKMTSSSEAFSWTSMGILMACACASLLPGLLKNKF 314
            |.|||.:|.||||.||||||.:||.||.||.|:|::.||.||.|:.:|...|..|:||...:.|.
Zfish   213 INVPLGVFFLGTFLGVAPPSFVAINAGTTLYKLTTAGEAVSWNSLLVLGVLAVVSILPVCFQKKL 277

  Fly   315 KHKKE 319
            :.|.|
Zfish   278 QQKLE 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stasNP_573225.1 SNARE_assoc 157..276 CDD:286425 71/118 (60%)
tmem41bNP_001073456.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 3/17 (18%)
SNARE_assoc 120..239 CDD:286425 71/118 (60%)
VTT domain, required for its function in autophagy. /evidence=ECO:0000250|UniProtKB:Q5BJD5 131..242 64/110 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588175
Domainoid 1 1.000 165 1.000 Domainoid score I3877
eggNOG 1 0.900 - - E1_COG0398
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H42740
Inparanoid 1 1.050 271 1.000 Inparanoid score I2977
OMA 1 1.010 - - QHG54676
OrthoDB 1 1.010 - - D1222755at2759
OrthoFinder 1 1.000 - - FOG0001464
OrthoInspector 1 1.000 - - oto39258
orthoMCL 1 0.900 - - OOG6_102890
Panther 1 1.100 - - LDO PTHR43220
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2849
SonicParanoid 1 1.000 - - X2798
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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