DRSC/TRiP Functional Genomics Resources

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Protein Alignment stas and tmem41b

DIOPT Version :9

Sequence 1:NP_573225.1 Gene:stas / 32737 FlyBaseID:FBgn0030850 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_001016955.1 Gene:tmem41b / 549709 XenbaseID:XB-GENE-978007 Length:278 Species:Xenopus tropicalis


Alignment Length:264 Identity:137/264 - (51%)
Similarity:178/264 - (67%) Gaps:12/264 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 QAMSADEKKA------------TKKSLVIVAGIFVASLVTMCYVYAIFPELNASEKQHLKIPRDI 120
            |.....||||            .:.||:|:..||:.:...|..||..||:|:..|::.:|:|||:
 Frog    15 QCNHGSEKKAPATGKVHSEGGSARMSLLILVSIFLCAASIMFLVYKHFPQLSEEEREKIKVPRDM 79

  Fly   121 QDAKMLAKVLDRYKDMYYFEVMFGVVVAYVFLQTFAIPGSLFLSILLGFLYKFPIALFLICFCSA 185
            .|||.|.|||.:|||.:|.||:......|:||||||||||:|||||.||||.||:||||:|.||.
 Frog    80 DDAKALGKVLSKYKDTFYVEVLVAYFTTYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSG 144

  Fly   186 LGATLCYTLSNLVGRRLIRHFWPKKTSEWSKHVEEYRDSLFNYMLFLRMTPILPNWFINLASPVI 250
            |||:.||.||.||||.::..:...|..:||:.||.:||.|.||::|||:||.|||||||:.||||
 Frog   145 LGASFCYLLSYLVGRPVVYKYLSDKAIKWSQQVERHRDHLINYIIFLRITPFLPNWFINITSPVI 209

  Fly   251 GVPLHIFALGTFCGVAPPSVIAIQAGKTLQKMTSSSEAFSWTSMGILMACACASLLPGLLKNKFK 315
            .|||.:|.||||.||||||.:||:||.||.::|::.||.||.|:.|||..|..|:||.:.:.|.|
 Frog   210 NVPLKVFFLGTFIGVAPPSFVAIKAGTTLYQLTTAGEAVSWNSVIILMVLAVLSILPAIFQKKLK 274

  Fly   316 HKKE 319
            .|.|
 Frog   275 KKFE 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stasNP_573225.1 SNARE_assoc 157..276 CDD:286425 75/118 (64%)
tmem41bNP_001016955.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 5/15 (33%)
VTT 116..235 CDD:378149 75/118 (64%)
VTT domain, required for its function in autophagy. /evidence=ECO:0000250|UniProtKB:Q5BJD5 127..238 68/110 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 168 1.000 Domainoid score I3781
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H42740
Inparanoid 1 1.050 279 1.000 Inparanoid score I2847
OMA 1 1.010 - - QHG54676
OrthoDB 1 1.010 - - D1222755at2759
OrthoFinder 1 1.000 - - FOG0001464
OrthoInspector 1 1.000 - - otm48366
Panther 1 1.100 - - LDO PTHR43220
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2849
SonicParanoid 1 1.000 - - X2798
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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