DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk23 and asic1a

DIOPT Version :9

Sequence 1:NP_001097011.1 Gene:ppk23 / 32731 FlyBaseID:FBgn0030844 Length:591 Species:Drosophila melanogaster
Sequence 2:XP_021333995.1 Gene:asic1a / 791696 ZFINID:ZDB-GENE-040513-2 Length:614 Species:Danio rerio


Alignment Length:567 Identity:121/567 - (21%)
Similarity:197/567 - (34%) Gaps:171/567 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 FFQNSTLHGVRYIAESGRPIGEKFMWFCFTSIGAVTALVIIMSLWEKFQTNPTITGLDTDFHNQN 98
            |...|||||:.:|....:...:..:|..|........:.:.:...:.:...|.:|.|| :.....
Zfish   139 FAHTSTLHGISHIFSYEKITAKCCLWVVFFLSSLTFLMYVCIDRIQFYLEYPHVTKLD-EITTPV 202

  Fly    99 VVFPTTVVCPEAAFDHDK-TYEKVYNTLANYDEAQAQMYTPFLRILTSLNFENVRDAKVLSQSIP 162
            :|||...:|...:....: |...:|:.            ...|.:|.|.:  .||:|.::.:|:.
Zfish   203 MVFPAVTICNLNSIRFSRITRNDLYHA------------GELLALLNSRH--EVREAHLVEESVM 253

  Fly   163 QNLLDAHTIRE--------WAF---EGHIDCKNVFVSCKYRDEDIPC-CDHFEPIYTEHGFCYAF 215
            :.|......|.        |.|   .|| |.|::.:||::|..  || .:.|..::|.:|.||.|
Zfish   254 EVLKSKTDFRSFKPRHFNMWEFYNRTGH-DIKDMLLSCQFRGS--PCRPEDFSVVFTRYGKCYTF 315

  Fly   216 NSRFKSTPTEDVKTGAPHDL-----YETDKKWALFFIPNSTSRIFIFSNEEYFGSDFNAQI-DWS 274
            ||.....|...||.|..:.|     .:.|:     ::|     ::..|:|..|.:....|| ...
Zfish   316 NSGETGPPRVSVKGGMGNGLEIMLDIQQDE-----YLP-----VWGESDESSFEAGIKVQIHSQD 370

  Fly   275 EPQLVEVRISKKNTYTTDDARQLSIGQ----RKCIFSDEVKLNYFP----------------DAY 319
            ||..::               ||..|.    :..:...|.:|.|.|                .||
Zfish   371 EPPFID---------------QLGFGVAPGFQTFVSCQEQRLVYLPAPWGSCKSTPPSSDYFRAY 420

  Fly   320 TFSSCMKQCRMNKAIKLCKC-------NPPFYKPIRELSCVINIFTNLIAYILLLYLTPKANVPM 377
            :.|:|...|.....::.|.|       :.|:..|:                   ||       ..
Zfish   421 SISACRTDCETRYLVENCNCRMVHMPGDAPYCTPV-------------------LY-------KE 459

  Fly   378 CSIKDFDCLDEFKSNITNIKDCLQCELSCSKTVF-------------NIDKLIKMSDRPES---- 425
            |:....|.|.|..|      |...||..|:.|.:             ::..|.|...:.|.    
Zfish   460 CAHPALDFLVETDS------DYCSCETPCNITRYSKELSFVKIPSKASVKYLAKKYSKSEKYITE 518

  Fly   426 ----LGVLVEFLTWPIIRYKR--EVLFGWVDLLVSFGGIASLFLGFSLLSGVEIIYYFTLRACCM 484
                |.|..|.|.:..|..::  ||    ..||...||...||:|.|:|:.:|:..|        
Zfish   519 NVMVLDVFFEALNYETIEQRKAYEV----AGLLGDIGGQMGLFIGASILTILELFDY-------- 571

  Fly   485 VYKNRQELYEIEEKIRQEPPPKIDLKLSLKSHNPRIGDTPTSAVLKV 531
                   |||: .|.|.       .:.|.|.|:....:|..:||..:
Zfish   572 -------LYEV-MKYRL-------CRCSNKKHHNNNNNTDHNAVFSL 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk23NP_001097011.1 ASC 34..476 CDD:279230 109/510 (21%)
asic1aXP_021333995.1 ASC 136..582 CDD:322155 115/544 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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