DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk23 and Asic1

DIOPT Version :9

Sequence 1:NP_001097011.1 Gene:ppk23 / 32731 FlyBaseID:FBgn0030844 Length:591 Species:Drosophila melanogaster
Sequence 2:XP_006257440.1 Gene:Asic1 / 79123 RGDID:71062 Length:559 Species:Rattus norvegicus


Alignment Length:590 Identity:119/590 - (20%)
Similarity:202/590 - (34%) Gaps:195/590 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 FQNS-TLHGVRYIAESGRPIGEKFMWFCFTSIGAVTAL-VIIMSLWEK---FQTNPTITGLDTDF 94
            |.|| ||||..::...|.|...:.:|    ::..|.|| ..:..:.::   :.:.|.:|.|| :.
  Rat    66 FANSCTLHGASHVFVEGGPGPRQALW----AVAFVIALGAFLCQVGDRVAYYLSYPHVTLLD-EV 125

  Fly    95 HNQNVVFPTTVVCPEAAFDHDKTYEKVYNTLANYDEAQAQMYTPFLRILTSLNFENVRDAKV-LS 158
            ....:|||....|               ||  |........|...|.:...|..:...|..| |:
  Rat   126 ATTELVFPAVTFC---------------NT--NAVRLSQLSYPDLLYLAPMLGLDESDDPGVPLA 173

  Fly   159 QSIPQNLLDAHTIREWAFEGHIDCKNVFV--SCKYRDEDI---------PCCDH-FEPIYTEHGF 211
            ...|:           ||.|.....:.|.  || :|.||:         ||..| |..::|.:|.
  Rat   174 PPGPE-----------AFSGEPFNLHRFYNRSC-HRLEDMLLYCSYCGGPCGPHNFSVVFTRYGK 226

  Fly   212 CYAFNSRFKSTP-TEDVKTGAPHDL-----YETDKKWALFFIPNSTSRIFIFSNEEYFGSDFNAQ 270
            ||.|||.....| .:.:|.|..:.|     .:.|:     ::|     ::..::|..|.:....|
  Rat   227 CYTFNSGQDGRPRLKTMKGGTGNGLEIMLDIQQDE-----YLP-----VWGETDETSFEAGIKVQ 281

  Fly   271 I-DWSEPQLVEVRISKKNTYTTDDARQLSIGQ----RKCIFSDEVKLNYFP-------------- 316
            | ...||..::               ||..|.    :..:...|.:|.|.|              
  Rat   282 IHSQDEPPFID---------------QLGFGVAPGFQTFVSCQEQRLIYLPSPWGTCNAVTMDSD 331

  Fly   317 --DAYTFSSCMKQCRMNKAIKLCKCNPPFYKPIRELSCVINIFTNLIAYILLLYLTPKANVPMCS 379
              |:|:.::|...|.....::.|.|.                         ::::  ..:.|.|:
  Rat   332 FFDSYSITACRIDCETRYLVENCNCR-------------------------MVHM--PGDAPYCT 369

  Fly   380 IKDF-DCLDEFKSNITNIKD---CLQCELSCSKTVFNID-KLIKMSDRPES-------------- 425
            .:.: :|.|.....:.. ||   |: ||:.|:.|.:..: .::|:..:..:              
  Rat   370 PEQYKECADPALDFLVE-KDQEYCV-CEMPCNLTRYGKELSMVKIPSKASAKYLAKKFNKSEQYI 432

  Fly   426 ------LGVLVEFLTWPIIRYKREVLFGWVDLLVSFGGIASLFLGFSLLSGVEIIYYFTLRACCM 484
                  |.:..|.|.:..|..|:  .:....||...||...||:|.|:|:.:|:..|        
  Rat   433 GENILVLDIFFEVLNYETIEQKK--AYEIAGLLGDIGGQMGLFIGASILTVLELFDY-------- 487

  Fly   485 VYKNRQELYEI------------EEKIRQEPPPKIDLKL-SLKSHNP-------RIGDTPTSAVL 529
                   .||:            :|..|......:.|.| .:|.|||       ..|.|..:.:|
  Rat   488 -------AYEVIKHRLCRRGKCQKEAKRSSADKGVALSLDDVKRHNPCESLRGHPAGMTYAANIL 545

  Fly   530 KVKPA 534
            ...||
  Rat   546 PHHPA 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk23NP_001097011.1 ASC 34..476 CDD:279230 103/510 (20%)
Asic1XP_006257440.1 ASC 63..541 CDD:295594 116/579 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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