DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk23 and scnn1b

DIOPT Version :9

Sequence 1:NP_001097011.1 Gene:ppk23 / 32731 FlyBaseID:FBgn0030844 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_001072437.1 Gene:scnn1b / 779891 XenbaseID:XB-GENE-949109 Length:646 Species:Xenopus tropicalis


Alignment Length:667 Identity:123/667 - (18%)
Similarity:212/667 - (31%) Gaps:238/667 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 HPPESRTQRFLETLVIFRRSLI-------YQTKE----FFQNSTLHGVRYIAESGRPIGEKFMWF 60
            |....|.:|:      |.|:|.       |..||    |..|:..||.:.|.:.|..  ::.|||
 Frog     3 HVKMKRLKRY------FTRALHRIQKGPGYTYKELLVWFCDNTNTHGPKRIIKEGPK--KRVMWF 59

  Fly    61 CFTSIGA-----------VTALV--IIMSLWEKFQT-----------NP---------------- 85
            ..|.:.|           :|.|.  :.:||...|:|           ||                
 Frog    60 ILTLVFAGLVFWQWGVLILTYLSYGVSVSLSIGFKTMEFPAVTVCNANPYKYSRVKPLLKDLDAL 124

  Fly    86 TITGLD--------------TDFHNQNVVFPTT-------VVCPEA---------AFDHDKTYEK 120
            ..|.||              ....||||....|       ||..|.         .||::..|.|
 Frog   125 VATALDRIQFSSQDQANTFTQSSTNQNVTLDPTLWNHIPLVVIDETDPSNPIVNNIFDNNAIYSK 189

  Fly   121 VYNTLANYDEAQ---AQMYTPFLRILTSLNFENVRDAKVLSQSIPQNLLDA-HTIREWAFEGHID 181
             .|:..|..|.|   :|.|...:::.|:.|          :|.:.:|.... ..::||..   :.
 Frog   190 -NNSFRNSSEDQTSYSQRYKVAMKLCTNNN----------TQCVYRNFTSGIQALQEWYL---LQ 240

  Fly   182 CKNVF--------VSCKYRDEDI---------PCC-DHFEPIY-TEHGFCYAFN-SRFKSTPTED 226
            ..::|        ::..::.||:         ||. .:|..|| .::|.||.|| .:....|...
 Frog   241 LSSIFSNVPLADRIAMGFKAEDLILTCLFGGQPCSYRNFTRIYDADYGNCYIFNWGQEGEDPMAS 305

  Fly   227 VKTGAPHDL---YETDKKWALFFIPNSTSRIFIFSNEEYFGSDFNAQIDWSEPQLVEVRI-SKKN 287
            ...||...|   .:.::...|.::..:.:...|...:..|            |.:.::.| :...
 Frog   306 ANPGADFGLKLVLDIEQGEYLPYVQTTAAARLILHQQRSF------------PFVKDLGIYAMPG 358

  Fly   288 TYTT-----DDARQLSIGQRKCIFSDE---VKLNY--FPDAYTFSSCMKQCRMNKAIKLCKCNPP 342
            |.|:     |....:......|..:..   |:..|  |..:|:..||::.|...:.::.|.|.. 
 Frog   359 TETSIAVLVDQLEHMEAPYSSCTVNGSDIPVQNLYAEFNSSYSIQSCLRSCYQEQMVQTCGCAD- 422

  Fly   343 FYKPIRELSCVINIFTNLIAYILLLYLTPKAN-VPMCSIKDF----DCLDEFKSNITNIKDCLQ- 401
                                     |..|..| ...||...:    .|....:.::.:.:.|:. 
 Frog   423 -------------------------YQYPLPNGSEYCSNDKYPDWVPCYYGLRDSVADRESCISL 462

  Fly   402 CELSCSKTVFNIDKLIKMSDRPES-----------------------------LGVLVEFLTWPI 437
            |:..|:.|.:.:  :|.|:|.|.:                             |.:..:...:..
 Frog   463 CQQPCNDTQYKM--VISMADWPSAGAQDWIFHVLSYEKDSSHNITVNRNGIVRLNIYFQEFNYRS 525

  Fly   438 IRYKREVLFGWVDLLVSFGGIASLFLGFSLLSGVEI-------IYYFTLRACCMVYKNRQELYEI 495
            |.........|  ||.:.||....::|.|:|..:|.       ::...|:....:...||.    
 Frog   526 ITESEATNVVW--LLSNLGGQFGFWMGGSVLCIIEFGEIIIDCVWITILKLLAWIKDRRQR---- 584

  Fly   496 EEKIRQ-----EPPPKI 507
                ||     :|||.:
 Frog   585 ----RQRAQYADPPPTV 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk23NP_001097011.1 ASC 34..476 CDD:279230 106/591 (18%)
scnn1bNP_001072437.1 ENaC 27..632 CDD:273304 116/637 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.