DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk23 and Asic5

DIOPT Version :10

Sequence 1:NP_001097011.1 Gene:ppk23 / 32731 FlyBaseID:FBgn0030844 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_071563.1 Gene:Asic5 / 63866 RGDID:69295 Length:495 Species:Rattus norvegicus


Alignment Length:554 Identity:108/554 - (19%)
Similarity:198/554 - (35%) Gaps:180/554 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 EFFQNSTLHGVRYIAESGRPIGEKFMWFCFTSIGAVTALVIIMSLWEKFQ--TN----PTITGLD 91
            :|..:::.||:..||::...: .|.:|.... :|:|:.||     |:.:.  .|    ||.|.::
  Rat    40 DFAISTSFHGIHNIAQNQNKV-RKVIWLSVV-LGSVSLLV-----WQIYSRLVNYFMWPTTTSIE 97

  Fly    92 TDFHNQNVVFPTTVVCPEAAFDHDKTYEKVYNTLANYDEAQAQMYTPF-------------LRIL 143
            ..: .:.:.||....|                   |.:..|.:..:.|             || |
  Rat    98 VQY-VEKIEFPAVTFC-------------------NLNRFQTEAVSRFGIIFFLWDIVSKVLR-L 141

  Fly   144 TSLNFENVRDAKVLSQSIPQNLLDAH---TIREWA-----FEGHIDCKNVFVSCKYRDEDIPCCD 200
            ..::..|....:.|      :.:.:|   :|.|:.     :..|    :..|.|::..:   .||
  Rat   142 QEISGNNTGSPEAL------DFVASHRNFSITEFVKNNGFYLNH----DTLVHCEFFGK---TCD 193

  Fly   201 --HFEPIYTEHGFCYAFNSRFKSTPTEDVKTGAPHDLYETDKKWALFFIPNSTS------RIFIF 257
              .|:.::||:|.|:.||.      .|:|::                  .|..|      ::.:.
  Rat   194 PKDFKHVFTEYGNCFTFNY------GENVQS------------------KNKVSVSGRGLKLLLD 234

  Fly   258 SNEEYF-----------GSDFNAQIDWSEPQLVEVRISKK-NTYTTDDARQL-SIGQR----KCI 305
            .::|.|           |..|.......|||...:.:|.. ..:.....||| :|.|.    :| 
  Rat   235 VHQEEFTDNPVPGFADAGVIFVIHSPKKEPQFDGLGLSSPVGMHARVTIRQLKTIHQEYPWGEC- 298

  Fly   306 FSDEVKLNYFPDAYTFSSCMKQCRMNKAIKLCKCNPPFYKPIRELSCVINIFTNLIAYILLLYLT 370
             :.::||..| ..|:...|:|:|:.....:||.|.|                          :|.
  Rat   299 -NPDIKLRNF-TTYSTYGCLKECKAKHIQRLCGCLP--------------------------FLL 335

  Fly   371 PKANVPMCSIKDFDCLDEFKSNITNIKDCL------QCELSCSKTVFN----------------I 413
            |...|....:|.::|:.....:|.....|.      .|.:.|.:|.:.                :
  Rat   336 PGNGVECDLLKYYNCVSPILDHIERKGLCTMGTHNSSCPVPCEETEYPATIAYSTFPSQRATKFL 400

  Fly   414 DKLIKMSD---RPESLGVLVEF--LTWPIIRYKREVLFGWVDLLVSFGGIASLFLGFSLLSGVEI 473
            .|.:..|.   |...:.:.:.:  |.:.|.:.::.|  ...:||...||...||.|.||::.:||
  Rat   401 AKKLNQSQEYIRENLVNIEINYSDLNYKITQQQKAV--SVPELLADVGGQLGLFCGASLITIIEI 463

  Fly   474 I-YYFTLRACCMVYKNRQELYEIEEKIRQEPPPK 506
            | |.||......::    .|.:|.|.|::..||:
  Rat   464 IEYLFTSFYWVFIF----FLLKILEMIQRTSPPQ 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk23NP_001097011.1 ASC 34..476 CDD:459966 99/521 (19%)
Asic5NP_071563.1 Binds the plasma membrane and stabilizes the channel in the closed state. /evidence=ECO:0000269|PubMed:27679529 1..30
ASC 41..466 CDD:459966 99/520 (19%)
GAS motif, ion selectivity filter. /evidence=ECO:0000250|UniProtKB:P78348 454..456 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.

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