DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk23 and asic-2

DIOPT Version :9

Sequence 1:NP_001097011.1 Gene:ppk23 / 32731 FlyBaseID:FBgn0030844 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_492099.1 Gene:asic-2 / 189058 WormBaseID:WBGene00012137 Length:545 Species:Caenorhabditis elegans


Alignment Length:582 Identity:117/582 - (20%)
Similarity:193/582 - (33%) Gaps:191/582 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 KEFFQNSTLHGVRYIAESGRPIGEKFMWFCFTSIGAVTALVIIMSLWE------KFQTNPTITGL 90
            |:|...||:..|.::|.:...|...| |.      |:...|:.|..:|      ||.:.|.....
 Worm    11 KDFSNWSTVAVVPHVANANNKISRIF-WI------AIFLFVLGMFAYELYILIAKFFSYPATVNT 68

  Fly    91 DTDFHNQNVVFPTTVVCPEAAFDH-----DKTYEKVYNTLANYDEAQAQMYTPFLRILTSLNFEN 150
            :..|..|  :||...||....:.:     :..:..|...:..|.:|....::.....|.:.|.|.
 Worm    69 EILFEKQ--IFPVVTVCNMNPYKYSVVKSNSAFSSVNTLMTTYSDATVGTFSTDKWGLYADNDET 131

  Fly   151 -----------VRDAKVLSQS--IPQNLLDAHTIREWAFEGHIDCKNVFVSCKYRDEDIPCCD-- 200
                       |.:|.::|.:  :|.....|..|::.:|.|                 |||.:  
 Worm   132 YDLDSRAADALVLEANLISDTAKVPALYTYADLIQDCSFAG-----------------IPCSESD 179

  Fly   201 ---HFEPIYTEHGFCYAFNS-----------------RFKSTPTEDVKTGAPHDLYETDKKWALF 245
               ..:|:|   |.||:||.                 :...|.|: .||....|...|.|.    
 Worm   180 FTKFIDPVY---GACYSFNEDASLNYSVSREGIQFGLKLMLTVTQ-TKTNGNTDSLPTTKL---- 236

  Fly   246 FIPNSTSRIFIFSNEEYFGSDFN---AQIDWSEPQLVEV--RISKKNTYTTDDARQLSIGQRKCI 305
                :.:||.:.|.....|.|.|   |.:.:.....|.:  .:..|..|.|            |:
 Worm   237 ----AGARIGVNSRGSSPGLDSNGIDAGVGYESAVSVSLTQNVRAKKPYGT------------CV 285

  Fly   306 FSDEVKLNYFPD-AYTFSSCMKQCRMNKAIKLCKC-NPPFYKPIRELSCVINIFTNLIAYILLLY 368
            ..:....:|:.| .||..:|...|:....|..|:| ||.                      |.|.
 Worm   286 DREPDSSDYYKDFIYTLETCFNGCKQRDTIAKCQCANPR----------------------LALG 328

  Fly   369 LTPKANVPMCSIKDFDCLDEFKSNIT----NIKDCLQCEL------------------------- 404
            .|..|..|:.:  |.|||...|.|.|    ||...::|..                         
 Worm   329 STDTACQPIKA--DLDCLQTLKGNQTSSTPNIDLLVECNCNPPCDESTYTPTVSLAQFPSTSYYV 391

  Fly   405 ---------SCSKTVFNIDKLIKMSDRPE-------SLGVLVEFLTWPIIRYKREVLFGWVDLLV 453
                     |||.|   ..|....||..:       .:.|.:|.|::.:  |.....:...:::.
 Worm   392 ATSSTAGVGSCSST---NSKFSSKSDCQKWYNNNGMIIQVFLETLSYEL--YTETAGYTVSNVIN 451

  Fly   454 SFGGIASLFLGFSLLSGVEII-YYFTLRACCMV------------YKNRQELYEIEEKIRQE 502
            ..||.|.|:||.|::|.||:. ....:.|.|:.            .:|...:.::|: :::|
 Worm   452 DLGGQAGLWLGLSVISVVEMTGLMLVMGAFCVTGGAIKMAPDDDEIENDHRIKDVED-VKKE 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk23NP_001097011.1 ASC 34..476 CDD:279230 111/540 (21%)
asic-2NP_492099.1 deg-1 12..474 CDD:273309 111/540 (21%)
ASC 13..471 CDD:279230 110/536 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.