DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk23 and del-4

DIOPT Version :9

Sequence 1:NP_001097011.1 Gene:ppk23 / 32731 FlyBaseID:FBgn0030844 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_492230.2 Gene:del-4 / 189033 WormBaseID:WBGene00012116 Length:527 Species:Caenorhabditis elegans


Alignment Length:632 Identity:112/632 - (17%)
Similarity:201/632 - (31%) Gaps:207/632 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IFRRSLIYQTKEFFQNSTLHGVRYIAESGRPIGEKFMWFCFTSIGAVTALVIIMS----LWE--- 79
            :|...|.|...:|...::.|||.:|..:..      .|     :.|...||:::|    :|:   
 Worm     3 VFWTGLKYVFTDFSCWTSTHGVPHIGMANA------RW-----LRAFWILVVVVSIALFIWQFIT 56

  Fly    80 ------KFQTNPTITGLDTDFHNQNVVFPTTVVC--------PEAAFDHD-KTYEKVYNTLANYD 129
                  .|..|     .:|........|||..:|        ...:.|.| ......||:    |
 Worm    57 LLTNYLSFSVN-----TETTLQFAERTFPTVTICHLNPWKLSETKSVDPDMSALIDAYNS----D 112

  Fly   130 EAQAQMYTPFLRILTSLNFENVRDAKVLSQSIPQNLLDAHTIREWAFEGHIDC----KNVFVSCK 190
            .:.||...|     .||..:..:      |:....|:.:..:.|..:....|.    .::.|||.
 Worm   113 SSSAQFGLP-----ASLTADRQQ------QASKWTLMYSERLNEKQYNDAADIAYSYDDMVVSCT 166

  Fly   191 YRDEDIPCCDHFEPIYT-EHGFCYAFNSRFKSTPTEDVKTGAPHDLYETDKKWALFFIPNSTSRI 254
            |..:.....| |...|. .:|.|..||:               ..:|.:.:...|:.:     |:
 Worm   167 YNAKTCNITD-FNDFYNPSYGNCLQFNT---------------DGMYSSSRAGPLYGL-----RM 210

  Fly   255 FIFSNEEYFGSDFNAQIDWSEPQLVEVRISKKNTYTTDD--------------------ARQLSI 299
            .:.::::.:       :.|:|...|.:.|..::.....|                    ..:||.
 Worm   211 VMRTDQDTY-------LPWTEASGVIIDIHMQDEIPYPDVFGYFAPPGTASSLGVSYVQTTRLSK 268

  Fly   300 GQRKCIFSDEVKLNYFPDAYTFSSCMKQCRMNKAIKLCKCNPPFYKPIRELSCVINIFTNLIAYI 364
            ....|....::|..::...||..:|.:.|...|.|..|.|..|.|...          :|...|:
 Worm   269 PYGSCTTKTKLKTTHYTGTYTVEACFRSCMQEKIIASCGCYYPAYSHA----------SNTTQYV 323

  Fly   365 LLLYLTPKANVPMCSIKDFDCLDEFKS------NITNIKDCLQ-CELSCSKTVFNIDKLIKMSDR 422
                   ..:..:.::.:.:|:|...|      ::....||.| ||:                  
 Worm   324 -------SCDNGVQTLSNLNCVDLINSADSTEFDVLTDCDCPQPCEI------------------ 363

  Fly   423 PESLGVLVEFLTWPI------------------------------------IRYKR---EVL--- 445
             :|.||.|....||.                                    |.|:|   :||   
 Worm   364 -DSYGVTVSTAQWPSDSYVPTECNPGGPSGPWDASGESCLDWYKANTILIEIYYERMNFQVLTES 427

  Fly   446 --FGWVDLLVSFGGIASLFLGFSLLSGVE--IIYYFTLRACCMVYKNRQELYEIEEKIRQEPPPK 506
              :.:|:.:...||...||||.|::|.:|  ::.:.....||.....|.|:.::|..|::.....
 Worm   428 PAYTFVNFISDVGGQVGLFLGMSIISAIEYLVLIFLVFFYCCTHKSRRAEIEQLEMDIKKAKDDV 492

  Fly   507 IDLKLSLKSHNPRIGDTPTSAVLKVKPAEESAGPNPLGGYQRKHEKD 553
            ..:....|.|     ....:.:.::..|.:...|.|       |..|
 Worm   493 DQVAEKRKKH-----QKANAELYEMDTAHDIVPPKP-------HSND 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk23NP_001097011.1 ASC 34..476 CDD:279230 96/541 (18%)
del-4NP_492230.2 ASC 8..466 CDD:295594 98/552 (18%)
deg-1 14..460 CDD:273309 96/540 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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