DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk23 and del-9

DIOPT Version :9

Sequence 1:NP_001097011.1 Gene:ppk23 / 32731 FlyBaseID:FBgn0030844 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_508622.2 Gene:del-9 / 182767 WormBaseID:WBGene00015957 Length:579 Species:Caenorhabditis elegans


Alignment Length:566 Identity:113/566 - (19%)
Similarity:188/566 - (33%) Gaps:176/566 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 QNSTLHGVR--YIAESGRPIGEKFMWFCFTSIGAVTALVIIMSLWEKFQTNPTITGLDTDFHN-- 96
            :.|||||:|  .::.|||   .:.:|          .|::|::|:..||....|    .|.::  
 Worm    85 ETSTLHGLRDVMLSSSGR---LRMVW----------VLIVILALFMTFQGCYQI----MDEYSMR 132

  Fly    97 -----------QNVVFPTTVVCPEAAFDHDKTYEKVYNTL-ANYDEAQAQMY--TPFLRI---LT 144
                       |::..|..||||             ||.| .::.||....:  ..||.:   ..
 Worm   133 RIVVSYFIQEAQSIWVPDVVVCP-------------YNRLNRSFIEANNVSFELAQFLELSFPSM 184

  Fly   145 SLNFENV--RDAKVLSQ----------SIPQNLLDAHTIREWAFEGHIDCKNVFVSCKYRDEDIP 197
            .|.|||:  :..:::|:          .:.||.:   |..::..:..::|:..|       ||..
 Worm   185 DLPFENIQQQQEEIISKIDTLDFQIEILLEQNNM---TYAQFLRKASLNCEAFF-------EDSR 239

  Fly   198 CCDHFEPIYTEHGFCYAFNSRFKSTPTEDVKTGAPHDLYETDKKWALFFIPNSTSRIFIFSNEEY 262
            .|.:...|.|..|.|:    |......|....| ..|.|..|       :|           |||
 Worm   240 RCANTTEIMTSAGKCF----RMAGIKQEIAGFG-NGDRYVID-------LP-----------EEY 281

  Fly   263 FGSDFNAQIDWSEPQLVEVRISKKNTYTTDDARQLSIGQRKCIFSDEVKLNYFPDA--------- 318
            :....|..|:..    |.::::::.....:|...|..|....:.....:..:..|.         
 Worm   282 YNPGINQMINSG----VIIKLAERGQGIDNDLTFLPAGVHAIMPLLGTQFEFMNDPPRYECEEDP 342

  Fly   319 ---YTFSSCMKQCRMNKAIKLCKCNP-----PFYKPIRELSCVIN-----IFTNLIAYILLLYLT 370
               |:...|.:.|....|.:.|:|:|     |.|.   :..|...     .||.|......|   
 Worm   343 HGNYSRVHCFEDCLTLDAQQTCQCSPAAAQNPAYP---DKLCTATQLYHCFFTKLFPEDSNL--- 401

  Fly   371 PKANVPMCSIKDFDCLDEFKSNITNIKDCLQCELSCSKTVFNIDKLIKMSDRPES---------- 425
            .||.|..|.                    .:|:..|.  .:|.:|.:..|..|..          
 Worm   402 SKAIVDACK--------------------KECKAPCH--AWNYNKQVSYSSIPSEASKKLLPREE 444

  Fly   426 ---------LGVLVEFLTWPIIRYKREVLFGWVDLLVSFGGIASLFLGFSLLSGVEIIYY---FT 478
                     |.:....|.:.||  |..:......|:...||..|||.|.||:|..:|:.|   :.
 Worm   445 WEKMKRKIILDIYYSELDYTII--KHVIAMPLSSLIAQIGGQFSLFAGGSLISLCQIVIYSVRYV 507

  Fly   479 LRACCMVYKNRQELYEIEEKIRQEPPPKIDLKLSLKSHNPRIGDTP 524
            :...|.:...|:...|..|  ..|...:.|::...::.......||
 Worm   508 MHKFCGLKSQRRRCRETRE--AHEARQRRDMRRRRRNSTSHSRSTP 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk23NP_001097011.1 ASC 34..476 CDD:279230 104/513 (20%)
del-9NP_508622.2 ASC 85..502 CDD:307141 104/513 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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