DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk23 and asic1

DIOPT Version :9

Sequence 1:NP_001097011.1 Gene:ppk23 / 32731 FlyBaseID:FBgn0030844 Length:591 Species:Drosophila melanogaster
Sequence 2:XP_004912018.1 Gene:asic1 / 100489966 XenbaseID:XB-GENE-977699 Length:525 Species:Xenopus tropicalis


Alignment Length:508 Identity:115/508 - (22%)
Similarity:195/508 - (38%) Gaps:139/508 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 FFQNSTLHGVRYIAESGRPIGEKFMW-FCFTSIGAVTALVIIMSLWEK---FQTNPTITGLDTDF 94
            |...|||||:.:|....|....:.:| .||  :|:::.|:.:.:  |:   :...|.:|.|| :.
 Frog    20 FASGSTLHGLAHIFTYERFSCRRLIWVLCF--LGSLSLLLYVCT--ERIIYYFEYPHVTKLD-EI 79

  Fly    95 HNQNVVFPTTVVCPEAAFDHDKTYEKVYNTLANYDEAQAQMYTPFLRILTSLN--FENVRDAKVL 157
            ....::||....|....|...:..:   |.|.:..|           :|:.||  :| :.|:::.
 Frog    80 STPRMIFPAVTFCNLNEFRFSRVTK---NDLYHAGE-----------LLSLLNNRYE-LPDSQLA 129

  Fly   158 SQSIPQNLLDAHTIREWAFE-----------GHIDCKNVFVSCKYRDEDIPC-CDHFEPIYTEHG 210
            .:.:.:.|.|....|.:..:           || |.:.:.:|||||.|:  | .|.|.|::|.:|
 Frog   130 DEKVMEILQDKANFRNFKPKPFNMREFYDRTGH-DIREMLLSCKYRGEE--CSVDDFVPVFTRYG 191

  Fly   211 FCYAFNS-RFKSTPTEDVKTGAPHDL-----YETDKKWALFFIPNSTSRIFIFSNEEYFGSDFNA 269
            .||.||| |...:|....|.|..:.|     .:.|:     ::|     ::..::|..|.:....
 Frog   192 KCYTFNSGRNGRSPLVTTKGGTGNGLELMLDIQQDE-----YLP-----VWGETDETSFEAGIKV 246

  Fly   270 QI-DWSEPQLVEVRISKKNTYTTDDARQLSIGQ----RKCIFSDEVKLNYFP------------- 316
            || ...||..::               ||..|.    :..:...|.:|.|.|             
 Frog   247 QIHSQDEPPFID---------------QLGFGVAPGFQTFVSCQEQRLTYLPPPWGDCKSSAMDS 296

  Fly   317 ---DAYTFSSCMKQCRMNKAIKLCK------------CNPPFYKPIRELSCVINIFTNLIAYILL 366
               |.|:.|:|...|.....::.|.            |.|..||...:.:              |
 Frog   297 EFFDTYSISACRIDCETRYLVENCNCRMVHMPGDAAYCTPELYKECADPA--------------L 347

  Fly   367 LYLTPKANVPMCSIKDFDCLDEFKSNITNI-KDCLQCELSCSKTVFNIDKLIKMSDRPESLGVLV 430
            .:|..|.|       || |:.|...|:|.. |:....::....:...:.|....|::..:..:||
 Frog   348 DFLVEKDN-------DF-CVCETPCNMTRYGKELSMVKIPSKASARYLAKKYNKSEQYIAENILV 404

  Fly   431 -----EFLTWPIIRYKR--EVLFGWVDLLVSFGGIASLFLGFSLLSGVEIIYY 476
                 |.|.:..|..|:  ||    ..||...||...||:|.|:|:.:|:..|
 Frog   405 LDIFFEALNYETIEQKKAYEV----AGLLGDIGGQMGLFIGASILTVLELFDY 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk23NP_001097011.1 ASC 34..476 CDD:279230 114/506 (23%)
asic1XP_004912018.1 ASC 18..507 CDD:413546 115/508 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.