DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43658 and arhgef10lb

DIOPT Version :9

Sequence 1:NP_001259643.1 Gene:CG43658 / 32729 FlyBaseID:FBgn0263706 Length:2263 Species:Drosophila melanogaster
Sequence 2:XP_009295163.1 Gene:arhgef10lb / 567649 ZFINID:ZDB-GENE-090313-222 Length:1369 Species:Danio rerio


Alignment Length:1559 Identity:399/1559 - (25%)
Similarity:656/1559 - (42%) Gaps:382/1559 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   605 HSHLSQRHQQQQQQQQQLQQTSFIGSPPSSASITTAQLHSAFSRRI-----AEQRERDQRDQRDQ 664
            |..|:..|....:.....|...|:|||         ::|.|.|:|.     :|..|.::|.:   
Zfish    12 HLLLTHNHPAAMETVCMRQSLKFLGSP---------KIHLAGSKRFSYFCWSEGVEDNKRHE--- 64

  Fly   665 REAVGCTAATIAGGSFSANGGQAAVGVGVGSSSSCGSSSERDTKSPCRERDRNLERDRDRERDKN 729
                                   ::..||             |:.|..|.:.:.:.:...|:.:.
Zfish    65 -----------------------SMVTGV-------------TQKPQEEEEEDEDDEETGEKFEF 93

  Fly   730 DDLGEEEVLTEEEQTSSSVSSLSAGNQRNSQLRSTFNKAKQHLSFDKWRTAATGSATGSASGPGS 794
            ||..:|:...|:::  |....:.|....:|.:.:.:.::.:|:.... :.|..|   |:.:|   
Zfish    94 DDSEDEKNAVEDKE--SGTPHVEAELSGSSDVNALYCQSMKHVMHSN-QPAVNG---GTPAG--- 149

  Fly   795 SATDSNNAAS------NMIMRRASACTMPSSGGGGGAGVGSSQREEAT----------TPGESPG 843
              .:..|..:      :|:.|:        |..|....:.....||.|          .|..|  
Zfish   150 --VEEQNMPTHPHTHPDMVARQ--------SPDGSSVSIEPRAAEEQTPILKRNIIYEAPVHS-- 202

  Fly   844 GRLSRWFSIRRGSSHQYDVGGRDGRHSTASSFDTP---DSGSGNSP------------------- 886
               ..|||:    ..:..:....|:....|:.|:|   :..:..:|                   
Zfish   203 ---REWFSV----VSELTLRLHKGKAVPESNGDSPPEQEKVNSTAPVRSEVVYDDVPCENITPPD 260

  Fly   887 -----------KNGSNAVAGTGGAGSQGVALDAASPQKLANLGASKMMPGVPE------------ 928
                       ::|.:.:...|...|:..:.|..|..:......:|:.|.|..            
Zfish   261 VVDDVIYEEVQRSGESGLIDNGWGSSEFESYDEQSDNETKQPTRNKISPDVRRLKQRCVQTRREL 325

  Fly   929 -----SEDDEATANRFDVDLMMTPGSRANGT------ARTAHNRLI------------------- 963
                 :.|.......:|:.:.....:..|||      .:.|..|.:                   
Zfish   326 AMRLGARDVGQLKQNYDIKVQQLMKAARNGTKDGLEKTKIAMMRKVSFLSKKECTDDTEDDTGYL 390

  Fly   964 ----------VPMLPPAPAGLSQQQLKRRHIVAAIVHSENSYVATLQRLVNDYKKPLEECSPPVL 1018
                      .|.|.|.|.|||.||:.||||:.:|:.||.||:.:|:|::.:|||||.|..|.:|
Zfish   391 DVTVSELKHPPPQLSPMPEGLSSQQVVRRHILGSIIQSERSYLDSLKRILLEYKKPLMEAEPRIL 455

  Fly  1019 NPVKIATLFHCLPDILHSHKLFRISLAECVRNWDRDEKIGDCFVSAFGKPQLLEIYSGFINNFSA 1083
            :..||..:|:.|.:||..|.:|:|:||..|..||..|||||.||::|.|..:|::||.::|||:.
Zfish   456 SLKKIQPIFYRLKEILQCHSMFQIALASRVAEWDNTEKIGDLFVASFSKSMVLDVYSDYVNNFTN 520

  Fly  1084 AMELAKMEEKRKSALADFFKVKQISAHDRLSFFGLMVKPVQRFPQFILFLQDLLKYTPQGHHDRM 1148
            ||.|.|.....|.|..:|.|.||.::.||::.:||||||:||||||||.|||:||.|..||.||:
Zfish   521 AMALIKKACMSKPAFLEFLKKKQATSIDRITLYGLMVKPIQRFPQFILLLQDMLKNTSVGHQDRL 585

  Fly  1149 SLQLALSQLELLAELLNESKREAEQYQAFKEMLGHISGTFNARSLSLSSVSV---SDSAGGHRPR 1210
            .|||||::||.|||.|||.||.|||....:::         |||:|..|:|.   ||.      :
Zfish   586 PLQLALTELETLAEKLNEQKRLAEQLAEIQQL---------ARSISDRSLSKQLNSDQ------K 635

  Fly  1211 YLLREDNVTHMEFNQAGFIVKCKQRRLLLLNDKVICVSVAPKQSHDFGAT----EKLTFKWMFPV 1271
            .|:..:.:....:.:.|.::|.|:|::.||||.:||.::..|...|..:.    .|...||..|:
Zfish   636 QLILSETLIETVYGEKGQVLKSKERKVFLLNDMLICANINVKGPPDISSLVPIGPKYAVKWTAPL 700

  Fly  1272 NDVEIVD--NSTSATLSRILTAGLNRGGSLKSNGSSGANGSPYANSTLPGHGGGVSGFSGFGDPH 1334
            ..|::|:  ..|......||....||  .|.|                                 
Zfish   701 PQVQVVEVGQETPQRKESILQQSSNR--RLSS--------------------------------- 730

  Fly  1335 SSPAAQLTNGADNLCSEMSTLMYDYEVISRIQDLVSSLKGSYKELNANTTRNVLNLIQGSIQRKD 1399
            |:|..:|..|...|..|:..|.:|..|:..:..||.:|:|||:.||....::....:|..|:.|:
Zfish   731 SNPQGKLFLGPPRLYQELQELQHDLTVVEEVTLLVGTLQGSYQNLNTTVGQDWCMALQRLIRIKE 795

  Fly  1400 EEMAWVDSCCLQLI--GR-HKSGKEETFT--FQTQTPAVKKEWITELRLAQLALDPNNSPAWERG 1459
            :|:...:.|.|:|:  |: .|||:..:||  |.|.:|..|..|:..|.||::||...|.|.|   
Zfish   796 DEIQCANKCRLRLMVPGKPDKSGRPVSFTVVFSTPSPISKISWVNRLHLAKIALREENLPGW--- 857

  Fly  1460 GSHPQPAHHHPHHHPLQHPHAGAGDPRQTQEQLQLQEAVQQKQSRKMPLFVKAMPVYKSQHQ--- 1521
                                            :.:::..:.|.....||....:||:..:.|   
Zfish   858 --------------------------------VCVEDDEKTKPPFWCPLLACRVPVFTPKVQDLK 890

  Fly  1522 ------TEVRCGCY-YSIANDTKQSGNARRRHKQLNYLWMCSSDGTSSH--ITVLA-QHPQQAGN 1576
                  ..|.|... :|.|:.:...|          |||: :|.|..||  :.:.: ..|..   
Zfish   891 LQAALYNPVHCALLGFSAASTSLPQG----------YLWV-ASRGDDSHGQVEIFSLNRPTP--- 941

  Fly  1577 LREAGAFDLFETQVSALEFV----KGLDQLKSRDEPASLLGDLVWLGTDSRKILIYSA------- 1630
             |...:|.| .:||..||::    ...:|.....|..|.:|:.:.:|.....|::|.:       
Zfish   942 -RSVKSFSL-GSQVLCLEYITEPSTEEEQETQASEVPSKIGNTICVGLLDGNIMVYGSVDTAAQC 1004

  Fly  1631 ----RNPEQ-----EEQLGSYSVPGAVQRILYHFDAVYVALSGATVLIF-RRGNDGVWQLRDPQT 1685
                .|||:     .:.||::               ::..||...|.:: |:..:|:|   ||.:
Zfish  1005 LLTFCNPERCHVLCLKHLGNF---------------LFAGLSNGKVAVYNRKSGEGLW---DPDS 1051

  Fly  1686 IR---LGDTDLVVPSLLPINMCIYASCGNRVYVMNALNGEIQRSFEVQHGATQQVNLMAHSGIGL 1747
            .|   :|...::  .||.|:.|::|||.|:|.|:...:...| ||||.......|..|..:|.|:
Zfish  1052 CRHVVIGYAPIL--KLLRIDQCVWASCANQVSVIEGSSLRTQ-SFEVHPDPMVSVTHMVRAGGGV 1113

  Fly  1748 WISLKNSTMLCLYHTETFKHLQDINIASSVLRHDGKKEQPLNNSSVYVTALMACKGLLWVGTNVG 1812
            |::....:.|.|:||||.:|||:||| |:...:....::|    ::.|::|:.|:|||||||..|
Zfish  1114 WMAFSEGSSLRLFHTETLEHLQEINI-STPSAYFSSAQKP----NLCVSSLLICQGLLWVGTAQG 1173

  Fly  1813 IAVTIPLPRLEGVPIISGGINMSCHAHFGPITFLL---PLIPKVYPAYKPPTVGAAPLVPSMGDD 1874
            |.||:|:|||||:|.|:|....|.:||.||:.|||   .::|:.:......|..   :..:.|.|
Zfish  1174 IIVTLPVPRLEGIPKITGKGMTSLNAHNGPVEFLLATSSVLPQDFLKRDSATDN---VDSNSGGD 1235

  Fly  1875 LQLPAIDADPKIQELD---DGAVVLRRDLAKEEMSSSN--PGADSTASSPRSSKLDKQNSLDQSF 1934
            .:.....::..:|:.|   .|....:..|.:..:.|::  ||...|| .|..:....|::::.|.
Zfish  1236 EKEATNSSEESLQQADATSQGEAKSKGVLLQYHLRSTSRLPGKVLTA-QPEETPDSAQHTVEHSL 1299

  Fly  1935 TAKIRASLANSPAFHRKRFRDDPNRMSKTLPR--GLGAAAAGSGAGG----ASAAGSGTASGNT 1992
            .......|::.|....:    .|...||...|  .:.:||..||..|    |:::.|..:|.||
Zfish  1300 EDGSIYELSDDPEVWVR----GPGTTSKEAGRREKVTSAAVISGGKGFRRLANSSHSAESSENT 1359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43658NP_001259643.1 RhoGEF 984..1153 CDD:279015 83/168 (49%)
arhgef10lbXP_009295163.1 RhoGEF 418..602 CDD:238091 94/183 (51%)
WD40 repeat 911..949 CDD:293791 11/52 (21%)
WD40 repeat 953..1009 CDD:293791 10/55 (18%)
WD40 repeat 1015..1047 CDD:293791 7/46 (15%)
WD40 repeat 1052..1094 CDD:293791 14/44 (32%)
WD40 repeat 1100..1138 CDD:293791 14/37 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 187 1.000 Domainoid score I3267
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D43489at33208
OrthoFinder 1 1.000 - - FOG0002580
OrthoInspector 1 1.000 - - otm24921
orthoMCL 1 0.900 - - OOG6_106477
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.820

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