Protein Alignment p-cup and wa-cup

DIOPT Version :10

• Sequence 1: NP_573216.1
• Gene: p-cup / 32727
• FlyBaseID: FBgn0030840
• Length: 538
• Species: Drosophila melanogaster
• Sequence 2: NP_649721.2
• Gene: wa-cup / 40892
• FlyBaseID: FBgn0037502
• Length: 580
• Species: Drosophila melanogaster
• Alignment Length: 525
• Identity: 165/525 - (31%)
• Similarity: 264/525 - (50%)
• Gaps: 50/525 - (9%)

  Fly     9 KSLLLRSQ--QSLVRPDLALLDIQISKRAIETMFGHRRELSFNHSHTADIIAKKCEELFNANEFE 71
            ::|:.|||  :|:.....||.|   ..||.:.:...:..::     ..::..:.|:.|:.:|..|
  Fly    71 RALMRRSQLKRSMGLASEALKD---CSRAEDLLMSRKPPVT-----NPNVSLEVCDALYESNRLE 127

  Fly    72 NALTTLYTDGRPF-GGQFAHG----RFEMIKQRSLAVFEDTLGESLRPFMHQHRDVLEQINRRQK 131
            ::...|:...:.| .||  .|    |..::.:.    |.|||.:...      ..|...|||...
  Fly   128 DSKINLHCHLKRFSSGQ--RGPVLDRLNVLNEN----FHDTLSDDTT------MSVQRLINRMMA 180

  Fly   132 ELAAHVSRPLWKKLRDQQQCDVQSIIIKERPQLTLLEKARRRASESLYNHNYLGRSAVDIALLRQ 196
            .||   ..|  |.::|  .|||.||:..|...|:.||.|||:....:||..||.:..||:|.|:.
  Fly   181 SLA---KEP--KDIKD--TCDVVSIMENEETHLSPLEMARRKRHFKIYNQTYLNKCWVDVAFLKT 238

  Fly   197 LRSDRNFLDPLRLATTPPMRKLTRRQFTIVRRLMKMLQARNPLYNRRYVQQRHGPIADQERRRWQ 261
            ||.|.|.|......::..:.||....:...|.|.|.|..|:|:|...  ||::...|...:.|
  Fly   239 LRDDPNVLPKHCKKSSEYLGKLMASNYKAERTLTKTLHTRSPMYALH--QQKYPNEAFYNKHR-- 299

  Fly   262 EMHLFHAQYQTRRDCMRMLHEVHKRRREGDVEKLSDYVENIMSGFIEYKTHRTLPWKFEFINEVY 326
            |.:|:..||||||:..::|..:....|.|::.||:.::|.:|..::..||:|.:||||||.||||
  Fly   300 EENLYRIQYQTRRNMFKILRSIRLLIRVGELNKLTTFIEEVMGDYVTIKTNRVMPWKFEFTNEVY 364

  Fly   327 NILALAYCDKCAVPANVDFLQAQNRPI-LYLLRTEKLHDMSVQFGGPNIYVEIEKE---DERHSR 387
            |.|.||..::..:|:|:..||.:.|.: |:.|......||..........:.|.:.   |.:...
  Fly   365 NYLGLARINEYKIPSNMTVLQGKQRLLTLFRLPLSNSLDMKKSKTKRTSALNITRSATTDPKAEH 429

  Fly   388 ISQKLEQLENRLRHSRFAIERSYLLFEIARCHFQESRFDKCLVVARKAFNEARSCNCLIWRFNSI 452
            ..:::.:||||:|.:.:.|||:|||.|:|:.|...:.||....:||.|..||..|..:||.|.|:
  Fly   430 FKKQVVRLENRMRFAEYHIERAYLLHELAQEHLNCNSFDGACSMARMALEEAIKCKSVIWSFLSL 494

  Fly   453 FLGCQVHAVLNRFERLKESLAKASQLASELQAPKLVAYIAICINVNNYDLALQRI--------RQ 509
            .:.|:.||:|.:.||.||.||:|.:||.:::...|..:|.|||.||..::.::|:        ||
  Fly   495 MVICKAHAILGKIEREKEILAEAFELAKKMKNLDLCLFIDICIKVNAEEMEMKRMVTTDLTAKRQ 559

  Fly   510 SDGNK 514
            ..|:|
  Fly   560 KFGSK 564

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
p-cup	NP_573216.1	None
wa-cup	NP_649721.2	TPR	22..>99	CDD:440225	10/30 (33%)
		TPR repeat	39..64	CDD:276809
		TPR repeat	69..99	CDD:276809	10/30 (33%)