DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p-cup and odad4

DIOPT Version :9

Sequence 1:NP_573216.1 Gene:p-cup / 32727 FlyBaseID:FBgn0030840 Length:538 Species:Drosophila melanogaster
Sequence 2:XP_002939085.2 Gene:odad4 / 100145076 XenbaseID:XB-GENE-5960304 Length:574 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p-cupNP_573216.1 None
odad4XP_002939085.2 TPR repeat 17..43 CDD:276809
PRK15331 <30..95 CDD:357168
TPR repeat 48..78 CDD:276809
TPR repeat 83..111 CDD:276809
TPR repeat 322..348 CDD:276809
TPR repeat 360..388 CDD:276809
TPR_12 361..423 CDD:315987
TPR repeat 393..432 CDD:276809
MDN1 <409..567 CDD:227596
TPR repeat 437..465 CDD:276809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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