DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8611 and AT1G71370

DIOPT Version :9

Sequence 1:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_177293.1 Gene:AT1G71370 / 843478 AraportID:AT1G71370 Length:558 Species:Arabidopsis thaliana


Alignment Length:593 Identity:172/593 - (29%)
Similarity:271/593 - (45%) Gaps:131/593 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 EDLLSIRE------LTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKD 401
            ||::...:      .|.||.:|||.:...|||:|.:.||||||||:.||.:|::::......:..
plant    25 EDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPH 89

  Fly   402 GVLALVIVPTRELVMQTYELIQKLVKPYTWIVPG----SLLGGESRKSEKARL-RKGINILIGTP 461
            .|:.::|.|||||..|    |.|:.:|:...:|.    .|:||...:::...| .:|.|:|||||
plant    90 QVMGVIISPTRELSAQ----IHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEGANLLIGTP 150

  Fly   462 GRLVDHLLHTASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQRMLL 526
            |||.|.:..........|:.||||||||||::|:::.|..::..:.|||           :..|.
plant   151 GRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQR-----------RTGLF 204

  Fly   527 SATLTSQVQQLAGLTLKNPLYIDNSDEAASAALKSKDGYQKETIEALLEVDDGLGEYQEDVTGVL 591
            |||.|..|..||...|:|.:.:.:..|:.|   |:..|...|.::.  |.|.             
plant   205 SATQTQAVADLAKAGLRNAMEVISGAESKS---KTSSGLYCEYLKC--EADQ------------- 251

  Fly   592 SIPENLQLSYVVVPPKLRLVALSSLLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVL 656
               ::.||.::::..|.:                   |.:||..|...|::...:|::       
plant   252 ---KSSQLVHLLIENKNK-------------------KLVVFFMTCACVDYWGLVLSK------- 287

  Fly   657 DEEDEQEKGDSDDDGDIPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVP 721
                            ||.|:.:.||..||.|.|..|......|.:.:|.|||.|||..||:|:|
plant   288 ----------------IPTLKSISFFSTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIP 336

  Fly   722 DIKLVVQYTPPQTTADFVHRVGRTARAGRKGRAVLFLTPSEAQFVRHLEKKRIRIQQGDMYAYLQ 786
            .|..||||.|||....|:||||||||..|:|||::||.|.|..:|..:..:|:.:|:        
plant   337 GIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIVFLMPKETDYVEFMRIRRVPLQE-------- 393

  Fly   787 TLLPKDDEARTVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFPKE--LKPIFNVRI 849
                     |...|.||::....::|...||.:.:|..:||||:::.|    ||  ...||:.:.
plant   394 ---------RKCSENASDVIPIIRSLAIKDRAVLEKGLQAFVSFVRAY----KEHHCSYIFSWKG 445

  Fly   850 AHMGHFAKSFALKEAP--SKFAAKHAAPKAAPPTNRLTYTE-------RD----------PEKIQ 895
            ..:|..|..:.:...|  |:............|...:|:.:       |:          .:|:|
plant   446 LEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKYKNKSREKQRQQNLLARKDKLQ 510

  Fly   896 AQKRAKRR 903
            .:||.||:
plant   511 QEKRGKRK 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8611NP_788922.1 DUF2413 203..>285 CDD:287302
P-loop_NTPase 332..548 CDD:304359 76/215 (35%)
DEXDc 348..554 CDD:214692 74/216 (34%)
HELICc 601..757 CDD:238034 50/155 (32%)
DUF4217 805..866 CDD:290667 16/64 (25%)
AT1G71370NP_177293.1 SrmB 6..500 CDD:223587 166/573 (29%)
DEADc 16..226 CDD:238167 76/215 (35%)
Helicase_C 250..363 CDD:278689 48/170 (28%)
DUF4217 407..461 CDD:290667 15/57 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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