DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8611 and AT5G54910

DIOPT Version :9

Sequence 1:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_200302.1 Gene:AT5G54910 / 835582 AraportID:AT5G54910 Length:739 Species:Arabidopsis thaliana


Alignment Length:652 Identity:178/652 - (27%)
Similarity:307/652 - (47%) Gaps:153/652 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 KKIGLFDQSDVEALKQ----------LGQRAVKPVKE-------------TIFTG----SKISTL 332
            |:|.|.:..::..|||          ....:::|:.:             |:|:.    .|.:.|
plant    12 KQIRLNEVEEINLLKQWIESQKPDSGFNPLSLRPLPKDSKIGKSEDGKNGTVFSRYAGVRKFAQL 76

  Fly   333 GLHPHAVKNLEDLLSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRI 397
            .:.....:.|:|...: ::|.||...||..|.|:|:|..::||||||||:.:|::|.|.::  |.
plant    77 PISDKTKRGLKDAKYV-DMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLHRE--RW 138

  Fly   398 QRKDGVLALVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLGG-ESRKSEKARLRKGINILIGTP 461
            ..:|||..::|.|||||..||:.::.|:.|.:.:.. |.|:|| |....||.|:.: :|||:..|
plant   139 SPEDGVGCIIISPTRELAAQTFGVLNKVGKFHKFSA-GLLIGGREGVDVEKERVHE-MNILVCAP 201

  Fly   462 GRLVDHLLHTASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQRMLL 526
            |||:.|:..|.:|:..:||.||||||||:|:..::..:..::..:.|.|           |.:|.
plant   202 GRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKHR-----------QTLLF 255

  Fly   527 SATLTSQVQQLAGLTLKNPLYIDNSDEAASAALKSKDGYQKETIEALLEVDDGLGEYQEDVTGVL 591
            |||.|.:|:.||.|:|::|.||....||.:|.                                 
plant   256 SATQTKKVKDLARLSLRDPEYISVHAEAVTAT--------------------------------- 287

  Fly   592 SIPENLQLSYVVVPPKLRLVALSSLLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVL 656
              |.:|..:.::||.:.:|..|.|.:...:::     :.:||:||.:.|.|.|:..|:       
plant   288 --PTSLMQTVMIVPVEKKLDMLWSFIKTHLNS-----RILVFLSTKKQVKFVHEAFNK------- 338

  Fly   657 DEEDEQEKGDSDDDGDIPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVP 721
                              |..|:....|||.|:|.:|.||:..|.:..| ||..|||:.||:|..
plant   339 ------------------LRPGIPLKSLHGKMSQEKRMGVYSQFIERQS-VLFCTDVLARGLDFD 384

  Fly   722 D-IKLVVQYTPPQTTADFVHRVGRTARAGRKGRAVLFLTPSEAQFVRHLEKKRIRIQQGDMYAYL 785
            . :..|||...|:..|.::||||||||...:|:::|||||||.:.:..|::.::.|:        
plant   385 KAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTPSEEKMIEKLQEAKVPIK-------- 441

  Fly   786 QTLLPKDDEARTVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFPKELKPIFNVRIA 850
              |:..:::  .:||.:..|    ..||....:|...:.:||:::::  |...:..|.||:|...
plant   442 --LIKANNQ--KLQEVSRLL----AALLVKYPDLQGVAQRAFITYLR--SIHKRRDKEIFDVSKL 496

  Fly   851 HMGHFAKSFALKEAPSKFAAKHAAPKAAPPTNRLTYTERDPEKIQAQKRAKRRFTTTVSGEVRQL 915
            .:.:|:.|..|                 |.|.|:.:|....:|       |..:.::::.|:...
plant   497 SIENFSASLGL-----------------PMTPRIRFTNLKTKK-------KGVYESSIAMEIENA 537

  Fly   916 QQ 917
            |:
plant   538 QE 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8611NP_788922.1 DUF2413 203..>285 CDD:287302
P-loop_NTPase 332..548 CDD:304359 80/216 (37%)
DEXDc 348..554 CDD:214692 79/206 (38%)
HELICc 601..757 CDD:238034 47/156 (30%)
DUF4217 805..866 CDD:290667 14/60 (23%)
AT5G54910NP_200302.1 SrmB 70..526 CDD:223587 167/579 (29%)
DEADc_DDX10 82..280 CDD:350699 81/213 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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