DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8611 and AT4G34910

DIOPT Version :9

Sequence 1:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_195217.1 Gene:AT4G34910 / 829643 AraportID:AT4G34910 Length:626 Species:Arabidopsis thaliana


Alignment Length:815 Identity:178/815 - (21%)
Similarity:298/815 - (36%) Gaps:269/815 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 GSPRVKPSSAVKESKKSSDIEDSGESGEESATSDEEPDESSAQSPGQEKEPKQTAKKPPKAEETS 287
            |..::||...|     :|::.|..|..||.    ||      |...:|:|.:|..::.||:.|  
plant     2 GKTKLKPVEDV-----NSEVVDEVEKAEEV----EE------QRNDREQEEEQKEEEAPKSFE-- 49

  Fly   288 STNRFRTKKIGLFDQSDVEALKQLGQRAVKPVKETIFTGSKISTLGLHPHAVKNLEDLLSIRELT 352
                    ::|| |...:.||.:.|                                   |.:.|
plant    50 --------ELGL-DSRLIRALTKKG-----------------------------------IEKPT 70

  Fly   353 SVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQ 417
            .:||..||.:|:||||:.|::|||||||||.|||::.|.......::|....|.::||:|||..|
plant    71 LIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLFSADSVSKKKLAPSAFILVPSRELCQQ 135

  Fly   418 TYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGI-NILIGTPGRL-----VDHLLHTASFKL 476
            .|..:..|::.....:....|......|:......|: .||:.||..:     ...|..||..: 
plant   136 VYTEVSSLIELCRVQLKAVQLTSSMSASDMRNALAGLPEILVSTPACIPKCFAAGVLEPTAVSE- 199

  Fly   477 TKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQQLAGLT 541
             .|..|:|||||.||..|||.:::. |.:|..:|.:|          :|:|||.:|.|::|..|.
plant   200 -SLSILVLDEADLLLSYGYEDNLRS-VTSIIPRRCQC----------LLMSATTSSDVEKLKKLI 252

  Fly   542 LKNPLYI----DNSDEAASAALKSKDGYQKETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYV 602
            |.||:.:    ||..|.|                                     :|.|:|..::
plant   253 LHNPIVLTLTEDNDKEEA-------------------------------------VPSNVQQFWI 280

  Fly   603 VVPPKLRLVALSSLLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEQEKGDS 667
            ....:.:|:.:.:||..||    .|.|.::|::|.:| .|...:..|..                
plant   281 SCSAQDKLLHILALLKLEV----VQKKILIFINTIDM-GFRLKLFLEKF---------------- 324

  Fly   668 DDDGDIPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATD-------------------- 712
                      |::...|:|.:.|..|..:...|.......|:|||                    
plant   325 ----------GIKSAILNGELPQNSRLHILEQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKEN 379

  Fly   713 ---------------VVGRGIDVPDIKLVVQYTPPQTTADFVHRVGRTARAGRKGRAVLFLTPSE 762
                           .|.||||...:..|:.:..||:...::||:|||.||...|.:|..::|.|
plant   380 KKNNKRSKPKLDAEFGVVRGIDFKKVHTVINFDMPQSVTGYIHRIGRTGRAYSSGSSVSLISPDE 444

  Fly   763 AQFVRHLEKKRIRIQQGDMYAYLQTLLPKDDEART-----VQEAASNLQHKFQTLLEDDRELHDK 822
            .:...            |:.::|.:...||.:..|     .:.|..:|:::.:.:.:...::..:
plant   445 MEGFE------------DIKSFLASDKNKDIDIITPFPLLTENAVESLRYRAEDVAKSVTKIAVR 497

  Fly   823 SCKA------FVSWMKFYSTF---PKEL------KPIFNVRIAHMGHFAKSFALKEAPSKFAAKH 872
            ..:|      .::..|..:.|   |::|      ||:  .:.|...|      ||:.|....   
plant   498 ESRAQDLRNEIINSEKLKAHFEANPRDLDLLRHDKPL--SKTAPAPH------LKDIPEYLV--- 551

  Fly   873 AAPKAAPPTNRLTYTERDPEKIQAQKRAKRRFTTTVSGEVRQLQQRDVGAQKPGAPPPKGGFIGG 937
                             |.:..:|.|..|  ......|..|:                    .||
plant   552 -----------------DAKTQEASKMVK--LARAAMGNTRR--------------------SGG 577

  Fly   938 GVGRSSFMKSLGKSRALNMSEFDSGLPPEGAAKRR 972
            |.||::..|...:..:..:..|:......||..::
plant   578 GGGRNNKNKKRSRKGSDPLKTFNPNGSKRGAVGQK 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8611NP_788922.1 DUF2413 203..>285 CDD:287302 17/61 (28%)
P-loop_NTPase 332..548 CDD:304359 72/221 (33%)
DEXDc 348..554 CDD:214692 74/215 (34%)
HELICc 601..757 CDD:238034 39/190 (21%)
DUF4217 805..866 CDD:290667 12/75 (16%)
AT4G34910NP_195217.1 SrmB 45..539 CDD:223587 143/634 (23%)
DEADc_DDX56 53..261 CDD:350719 77/256 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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