DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8611 and AT3G18600

DIOPT Version :9

Sequence 1:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_188490.1 Gene:AT3G18600 / 821391 AraportID:AT3G18600 Length:568 Species:Arabidopsis thaliana


Alignment Length:646 Identity:199/646 - (30%)
Similarity:312/646 - (48%) Gaps:135/646 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 SAVKESKKSSDIEDSGESGEE------SATSDEEPDESSAQSPGQEKEPKQTAKKPPKAEETSST 289
            |:|:|.||.......|:..|:      :.|.:|..||:      |:|..|:..|...|.||    
plant     7 SSVEELKKRVRKRSRGKKNEQQKAEEKTHTVEENADET------QKKSEKKVKKVRGKIEE---- 61

  Fly   290 NRFRTKKIGLFDQSDVEALKQ-LGQRAVKPVKETIFTGSKISTLGLHPH---AVKNLEDLLSIRE 350
                       ::..|||::. ..::.:..|.:.|.|.....:|.|...   |:|.    :..:.
plant    62 -----------EEEKVEAMEDGEDEKNIVIVGKGIMTNVTFDSLDLSEQTSIAIKE----MGFQY 111

  Fly   351 LTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELV 415
            :|.:|..:|..:|:|||||..::||||||||:.:|.||||.|:  |...::|...:||.|||||.
plant   112 MTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELLFKE--RFSPRNGTGVIVICPTRELA 174

  Fly   416 MQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTASFKLTKLQ 480
            :||..:.::|:|.::..| ..::||.:|:||..|:..|.|::|.|||||:|||.:|.:|....|:
plant   175 IQTKNVAEELLKHHSQTV-SMVIGGNNRRSEAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLK 238

  Fly   481 FLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQQLAGLTLKNP 545
            .|::|||||:||..:|.|:.::::.:.|.|           |..|.|||.||:|:.||.::|.:|
plant   239 CLVIDEADRILEENFEEDMNKILKILPKTR-----------QTALFSATQTSKVKDLARVSLTSP 292

  Fly   546 LYIDNSDEAASAALKSKDGYQKETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRL 610
            :::|                          ||||    :..||.     |.|:..|.|||.|.||
plant   293 VHVD--------------------------VDDG----RRKVTN-----EGLEQGYCVVPSKQRL 322

  Fly   611 VALSSLLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEQEKGDSDDDGDIPL 675
            :.|.|.|.|.::.     |.:||.||.:.|.||.:::                |....|..||  
plant   323 ILLISFLKKNLNK-----KIMVFFSTCKSVQFHTEIM----------------KISDVDVSDI-- 364

  Fly   676 LQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYTPPQTTADFVH 740
                     ||.|.|..|...|..|......:||.|||..||:|:|.:..::||.||....:::|
plant   365 ---------HGGMDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIH 420

  Fly   741 RVGRTARA-GRKGRAVLFLTPSEAQFVRHLEKKRIRIQQGDMYAYLQTLLPKDDEARTVQEAASN 804
            |||||||. |.||:|:|.|.|.|.||:|:|:..::.::                |....::..||
plant   421 RVGRTARGEGAKGKALLVLIPEELQFIRYLKAAKVPVK----------------ELEFNEKRLSN 469

  Fly   805 LQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFPKELKPIFNVRIAHMGHFAKSFALKEAP 865
            :|...:..:..|..|:..:..|:.:::..|::  ..||.||||....:...|:||.....|
plant   470 VQSALEKCVAKDYNLNKLAKDAYRAYLSAYNS--HSLKDIFNVHRLDLLAVAESFCFSSPP 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8611NP_788922.1 DUF2413 203..>285 CDD:287302 16/59 (27%)
P-loop_NTPase 332..548 CDD:304359 85/218 (39%)
DEXDc 348..554 CDD:214692 82/205 (40%)
HELICc 601..757 CDD:238034 55/156 (35%)
DUF4217 805..866 CDD:290667 15/61 (25%)
AT3G18600NP_188490.1 SrmB 86..553 CDD:223587 176/546 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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