DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8611 and ddx18

DIOPT Version :9

Sequence 1:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001016776.1 Gene:ddx18 / 549530 XenbaseID:XB-GENE-6085268 Length:640 Species:Xenopus tropicalis


Alignment Length:719 Identity:199/719 - (27%)
Similarity:340/719 - (47%) Gaps:168/719 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 KSNKKPKNPNQLPTPGDLFRAQLEEERRQK------------------RREEGGGDQEASADEED 215
            |.|:|.:|.|:              |||::                  .||||.|....   ||.
 Frog    15 KKNEKIRNRNR--------------ERREREALSLASKCAEEAEGVAEEREEGDGVNNV---EET 62

  Fly   216 AKNNSGGGSPRVKPSSAVKESKKSSDIEDSGESGEESATSDEEPDESSAQSPGQEKEPKQTAKKP 280
            .:|.|.......:|.:|.|:.|:.:..:   ..|.::..:.:|..|.|.|....|...:..|::.
 Frog    63 QQNTSVDVGETSQPPTAKKKKKRKNAAK---AEGADAKKAKQEAPEGSDQESKCENHVETKAEEE 124

  Fly   281 PKAEETSSTNRFRTKKIGLFDQSDVEAL-KQLGQRAVKPVKETIFTGSKISTLGLHPHAVKNLED 344
            .:.||...|  ......|.|:.:...:| :.:.:..::.|.|..||                   
 Frog   125 AEEEEDGPT--LPMGLTGAFEDTAFSSLAESVNENTLRAVTEMGFT------------------- 168

  Fly   345 LLSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIV 409
                 .:|.:|.|.|..:|:|:|||..::||||||||:.:|.:||:.|.  :...::|...|::.
 Frog   169 -----HMTEIQHKAIRPLLEGRDVLAAARTGSGKTLAFLIPAIELVYKL--KFMPRNGTGVLILS 226

  Fly   410 PTRELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTASF 474
            |||||.||||.::::|:..:.... |.::||.:|.:|..:|..|:||::.|||||:||:.:|..|
 Frog   227 PTRELAMQTYGVLKELMAHHVHTF-GLIMGGSNRSAEAQKLANGVNIVVATPGRLLDHMQNTPGF 290

  Fly   475 KLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQQLAG 539
            ....||.|::|||||:||:|:|:::||::..:.|:|           |.||.|||.|.:|:.||.
 Frog   291 MYKNLQCLVIDEADRILEVGFEQEMKQIINLLPKRR-----------QTMLFSATQTRKVEDLAR 344

  Fly   540 LTL-KNPLYIDNSDEAASAALKSKDGYQKETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVV 603
            ::| |.|||:                              |:.:::|..|     .:.|:..|||
 Frog   345 ISLKKEPLYV------------------------------GVDDHKETAT-----VDGLEQGYVV 374

  Fly   604 VPPKLRLVALSSLLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEQEKGDSD 668
            .|.:.|.:.|.:.|.|.     ::.|.:||.|:...|.:|:::||..                  
 Frog   375 CPSEKRFLLLFTFLKKN-----RKKKMMVFFSSCMSVKYHYELLNYI------------------ 416

  Fly   669 DDGDIPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYTPPQ 733
               |:|::      .:||...||:|...|..|.:..|.:||.|||..||:|:|::..:|||.||.
 Frog   417 ---DLPVM------AIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDPPD 472

  Fly   734 TTADFVHRVGRTARA--GRKGRAVLFLTPSEAQFVRHLEKKRIRIQQGDMYAYLQTLLPKDDEAR 796
            ...:::||||||||.  || |.|:|.|.|.|..|:|:|::.::.:.:.: :::            
 Frog   473 DPKEYIHRVGRTARGIDGR-GHALLILRPEELGFLRYLKQAKVPLSEFE-FSW------------ 523

  Fly   797 TVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFPKELKPIFNVRIAHMGHFAKSFAL 861
               ...|::|.:.:.|:|.:..||..:.:|:.::::.|.:...  |.||:|...::...|.||..
 Frog   524 ---SKISDIQTQLEKLIEKNYYLHKSAQEAYKAYIRAYDSHSH--KQIFDVNTLNLPKVAISFGF 583

  Fly   862 KEAP 865
            :..|
 Frog   584 QVPP 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8611NP_788922.1 DUF2413 203..>285 CDD:287302 17/81 (21%)
P-loop_NTPase 332..548 CDD:304359 81/216 (38%)
DEXDc 348..554 CDD:214692 82/206 (40%)
HELICc 601..757 CDD:238034 52/157 (33%)
DUF4217 805..866 CDD:290667 15/61 (25%)
ddx18NP_001016776.1 SrmB 145..634 CDD:223587 166/567 (29%)
DEADc 147..354 CDD:238167 86/244 (35%)
HELICc 368..497 CDD:238034 53/161 (33%)
DUF4217 529..587 CDD:290667 14/59 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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