DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8611 and pit

DIOPT Version :9

Sequence 1:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001287459.1 Gene:pit / 42595 FlyBaseID:FBgn0266581 Length:680 Species:Drosophila melanogaster


Alignment Length:862 Identity:229/862 - (26%)
Similarity:372/862 - (43%) Gaps:246/862 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 KITRAERLGKKQRQGKPLTKLSEEQITRALKSNKKPKNPNQL-----------PTPGDLFRAQLE 192
            ||.:.|:: ||:...|...|.:::|.......||..|.|.:|           ....|...|.|.
  Fly    11 KIVKREKM-KKELSQKKGNKNAQKQEPPKQNGNKPSKKPEKLSKKHVAKDEDDDLEEDFQEAPLP 74

  Fly   193 EERRQKRR------EEGGGDQEASADEEDAKNNSGGGSPRVKPSSAVKESKKSSDIEDSGESGEE 251
            ::::||:.      :....|.|:..||::                  .|:.:.||:::..|..||
  Fly    75 KKKQQKQPPKKQQIQVANSDSESDDDEQE------------------DEADEDSDLDEVAEVDEE 121

  Fly   252 SATSDEEPDESSAQSPGQEKEPKQTAK-----------KPPKAEETSSTNRFRTKKIGLFDQSDV 305
            ...|..|.|:.......:|..|.:..|           ||.|.:|..:..    ..:...|..|.
  Fly   122 DVDSGSEDDDQQEDEDEEEPVPAKKTKLLPNKSKAQNGKPAKDDEPFTVE----SSLAALDYRDS 182

  Fly   306 E-----ALK-QLGQRAVKPVKETIFTGSKISTLGLHPHAVKNLEDLLSIRELTSVQQKTIPEVLQ 364
            :     :|| .:.:..::.:||..||                        |:|.:|.|::..:|:
  Fly   183 DDRSFASLKGAVSEATLRAIKEMGFT------------------------EMTEIQSKSLTPLLK 223

  Fly   365 GKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKLV--K 427
            |:|::..:|||||||||:.:|.|||:.|.  |...::|...::|.|||||.|||:.::::|:  .
  Fly   224 GRDLVGAAQTGSGKTLAFLIPAVELINKL--RFMPRNGTGVIIISPTRELSMQTFGVLKELMAHH 286

  Fly   428 PYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLE 492
            .:|:   |.::||.:|:.|..:|.||||||:.|||||:|||.::..|....||.||:||.||:||
  Fly   287 HHTY---GLVMGGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILE 348

  Fly   493 LGYERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQQLAGLTLKN-PLYI---DNSDE 553
            :|:|.::||::..:.|:|           |.||.|||.|::::.|:.|.||: |:|:   ||.|.
  Fly   349 IGFEEELKQIINLLPKRR-----------QTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDT 402

  Fly   554 AASAALKSKDGYQKETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVALSSLLA 618
            |      :.||                                |:..|:|.|.:.||:.|.:.|.
  Fly   403 A------TVDG--------------------------------LEQGYIVCPSEKRLLVLFTFLK 429

  Fly   619 KEVDASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEQEKGDSDDDGDIPLLQGLRFFK 683
            |.     ::.|.:||.|:...|.:||::.|..                     |:|:.      .
  Fly   430 KN-----RKKKVMVFFSSCMSVKYHHELFNYI---------------------DLPVT------S 462

  Fly   684 LHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYTPPQTTADFVHRVGRTAR- 747
            :||...||:|...|..|.:..|.:||.|||..||:|:|.:..:|||.||....:::|||||||| 
  Fly   463 IHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARG 527

  Fly   748 AGRKGRAVLFLTPSEAQFVRHLEKKRIRIQQGDMYAYLQTLLPKDDEARTVQEAASNLQHKFQTL 812
            :|..|.|:|.:.|.|..|:|:|:..::.:                :|.....:..:::|.:.:.|
  Fly   528 SGTSGHALLLMRPEELGFLRYLKAAKVPL----------------NEFEFSWQKIADIQLQLEKL 576

  Fly   813 LEDDRELHDKSCKAFVSWMKFYSTFPKELKPIFNVRIAHMGHFAKSFALKEAPSKFAAKHAAPKA 877
            :..:..|:..:.:||.|:::.|.:  .:||.||||....:...||||..               .
  Fly   577 IAKNYFLNQSAKEAFKSYVRAYDS--HQLKQIFNVNTLDLQAVAKSFGF---------------L 624

  Fly   878 APPTNRLTYTERDPEKIQAQKRAKRRFTTTVSGEVRQLQQRDVGAQKPGAPPPKGGFIGGGVGRS 942
            .||...|                                  .|||.|...|..:.|  |||.|  
  Fly   625 VPPVVDL----------------------------------KVGAAKRERPEKRVG--GGGFG-- 651

  Fly   943 SFMKSLGKSRALNMSEF 959
             |.|.:.:..|.....|
  Fly   652 -FYKKMNEGSASKQRHF 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8611NP_788922.1 DUF2413 203..>285 CDD:287302 19/92 (21%)
P-loop_NTPase 332..548 CDD:304359 83/218 (38%)
DEXDc 348..554 CDD:214692 87/211 (41%)
HELICc 601..757 CDD:238034 51/156 (33%)
DUF4217 805..866 CDD:290667 17/60 (28%)
pitNP_001287459.1 SrmB 186..677 CDD:223587 189/664 (28%)
DEADc 187..394 CDD:238167 89/246 (36%)
HELICc 408..537 CDD:238034 52/160 (33%)
DUF4217 569..627 CDD:290667 17/74 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451630
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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