DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8611 and abs

DIOPT Version :9

Sequence 1:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_524220.1 Gene:abs / 40530 FlyBaseID:FBgn0015331 Length:619 Species:Drosophila melanogaster


Alignment Length:679 Identity:164/679 - (24%)
Similarity:281/679 - (41%) Gaps:176/679 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 KQRQGKPLTKLSEEQITRALKSNKKPKNPNQLPTPGDLFRAQLEEERRQKRREEGGGDQEASADE 213
            |:|:.:.:.||.  :|.:.:....:||:.::                     .|...|.:.:.|.
  Fly    31 KERKKQHMIKLG--RIVQLVSETAQPKSSSE---------------------NENEDDSQGAHDV 72

  Fly   214 EDAKNNSGGGSPRVK------PSSAVKESKKSSDIEDSGESGEESATSDEEPDESSAQSPG---- 268
            |     :.|....:.      ....:.|:||.|.:       |:....:|:..||.||...    
  Fly    73 E-----TWGRKYNISLLDQHTELKKIAEAKKLSAV-------EKQLREEEKIMESIAQQKALMGV 125

  Fly   269 -------QEKEPKQTAKKPPK-----AEETSSTNRFRTKKIGLFDQSDVEALKQLGQRAVKPVKE 321
                   |.::|.:||.|||:     :||.....|...:.:       ||     |:....|::.
  Fly   126 AELAKGIQYEQPIKTAWKPPRYIREMSEEEREAVRHELRIL-------VE-----GETPSPPIRS 178

  Fly   322 TIFTGSKISTLGLHPHAVKNLEDLLSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPL 386
              |...|.      |..:.|......|:..|.:|.:.:|.||.|:|::..:.|||||||.:.||:
  Fly   179 --FREMKF------PKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPV 235

  Fly   387 VELLQKQQPRI--QRKDGVLALVIVPTRELVMQTYELIQKLVKPY---------TWIVPGSLLGG 440
            :....:|:..:  :|.:|...|:|.|:|||..||:|:||...|..         :.:..|.|...
  Fly   236 IMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVS 300

  Fly   441 ESRKSEKARLRKGINILIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLELGYERDVKQLVEA 505
            |:...    :.:|::|::.|||||:| :|......|...::|.:|||||::::|:|.||:.:...
  Fly   301 EALDV----ISRGVHIVVATPGRLMD-MLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSF 360

  Fly   506 IDKQRAECEDKELPQLQRMLLSATLTSQVQQLAGLTLKNPLYIDNSDEAASAALKSKDGYQKETI 570
            ...||           |.:|.|||:..::|..|...|..|:.| |...|.:|::           
  Fly   361 FKGQR-----------QTLLFSATMPKKIQNFARSALVKPVTI-NVGRAGAASM----------- 402

  Fly   571 EALLEVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVALSSLLAKEVDASPKQFKAIVFMS 635
                           :||        .|:.|  |..:.::|.|...|.|  .|.|    .::|..
  Fly   403 ---------------NVT--------QQVEY--VKQEAKVVYLLDCLQK--TAPP----VLIFAE 436

  Fly   636 TTEMVNFHHDMLNEALTRRVLDEEDEQEKGDSDDDGDIPLLQGLRFFKLHGSMTQTERQGVFRGF 700
            ..:.|:..|:.|                           ||:|:....:||...|.||......:
  Fly   437 KKQDVDCIHEYL---------------------------LLKGVEAVAIHGGKDQEERSRAVDAY 474

  Fly   701 RDCASCVLLATDVVGRGIDVPDIKLVVQYTPPQTTADFVHRVGRTARAGRKGRAVLFLTPSEAQF 765
            |.....||:||||..:|:|.|:::.|:.|..|....::|||:|||.|:..||.|...:..:..|.
  Fly   475 RVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQS 539

  Fly   766 VRHLEKKRIRIQ-QGDMYAYLQTLLPKDD 793
            |. |:.|.:.|: :.::..:|..|.|:.:
  Fly   540 VL-LDLKHLLIEGKQEVPDFLDELAPETE 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8611NP_788922.1 DUF2413 203..>285 CDD:287302 21/103 (20%)
P-loop_NTPase 332..548 CDD:304359 68/226 (30%)
DEXDc 348..554 CDD:214692 68/216 (31%)
HELICc 601..757 CDD:238034 43/155 (28%)
DUF4217 805..866 CDD:290667
absNP_524220.1 DEADc 179..393 CDD:238167 71/236 (30%)
DEXDc 192..397 CDD:214692 68/221 (31%)
Helicase_C 414..523 CDD:278689 38/141 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451625
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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