DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8611 and mus301

DIOPT Version :9

Sequence 1:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_648178.1 Gene:mus301 / 38905 FlyBaseID:FBgn0002899 Length:1051 Species:Drosophila melanogaster


Alignment Length:736 Identity:151/736 - (20%)
Similarity:275/736 - (37%) Gaps:166/736 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 LSEEQITRALKSNKKPKNPNQLPTP----GDLF--RAQLEEERRQKRREEGGGDQEASADEEDAK 217
            ||||..:   :|:.|.:....|..|    .|.|  .|.| |:....|:||..|.|..::..:..:
  Fly    15 LSEESTS---ESHAKRQCTENLFWPEGEDDDSFFSNAHL-EDLLDGRKEELFGTQATTSTNKMTQ 75

  Fly   218 NNSGGG-----------SPRVKPSSAVKESKKSS-------DIEDSGESGEESATSDEEPDESSA 264
            :.|..|           :..|.|:||.|..:.|:       |:.|. |:.::........|.|.|
  Fly    76 SGSDDGLGLFADTSFPSAQSVPPNSASKPDEASAPTDKHQIDLADE-ENADKLFKKINLNDLSIA 139

  Fly   265 QSP----GQE--KEP----------KQTAKKPPKAEETSSTNRFRTKKIGLFDQSDVEALKQ--- 310
            :..    |.:  .:|          ..|.|||...|:..:.  .:...:....:|.:|.|.|   
  Fly   140 EMEDIFHGADDFSDPMVQNTQLFLDAMTFKKPKTPEKLLAP--LKDDSMSFISKSVIEGLVQGTQ 202

  Fly   311 -------LGQRAVKPVK-ET-IFTG------------SKISTLGLHPHAVKNLEDLLSIRELTSV 354
                   ..|..:.||. || .|..            ||....|| |..||.:  :|..:.:.|:
  Fly   203 YVTCEELKNQSLLDPVNWETQAFADFEKNNQDIDKFPSKGEFYGL-PDKVKKM--ILEHKGINSL 264

  Fly   355 QQ-----KTIPEVLQGKDVLVRSQTGSGKTL-AYALPLVELLQKQQPRIQRKDGVLALVIVPTRE 413
            .:     ..:|.:.|.|:::....|..|||| |..|.|.|||.:::.         .|.|:|...
  Fly   265 YEWQDECLNLPAIRQRKNLIYALPTSGGKTLVAEILMLRELLCRERN---------VLFILPYVS 320

  Fly   414 LVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGR-LVDHLLHTASFKLT 477
            :|.:....:........:||.....|......:..|.|:.:.|.....|. |:|.|:...  :..
  Fly   321 IVQEKVSAMSPFAIDLDFIVEEYTAGKGKCPPQPRRKRRSLFIASIEKGAVLMDSLIDVQ--RPH 383

  Fly   478 KLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQQLAGLTL 542
            ::..:::||...:.|.|....::..:..:                 |.|:|.:     |:.|::.
  Fly   384 EIGLVVVDELHLIGEKGRGATLEAFLTKV-----------------MFLNANI-----QIVGMSA 426

  Fly   543 KNPLYIDNSDEAASAALKSKDGYQ--------KETIEA---LLEVDDGLGEYQEDVTGVLSIP-E 595
            .    |.|..|.:|  ..:.|.|.        ||.|:.   |||::.. |:..|::    .:| .
  Fly   427 T----IGNLSEISS--FLNADVYTRGFRPVELKEYIKCGPDLLEINSA-GQTLEEI----FVPSR 480

  Fly   596 NLQLSYVVVPPKLRLVALSSLLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEED 660
            :::.:|.....:.....|:.|::   :.:|:.. .:||..:.:.......:|:..:.:....|..
  Fly   481 SVEYNYSEAVKRADPDHLAGLIS---ECAPEHC-CLVFCPSRKNCENVALLLSRIVPKHKFFEHR 541

  Fly   661 EQEKGDSDDDGD------IPLL-----QGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVV 714
            ..||.|..|..|      .|:|     .|:.:.  |..:|..||:.:...:|.....|:..|..:
  Fly   542 RSEKLDLMDALDKMCGILSPVLAKTLPYGIAYH--HSGLTTDERKYIETAYRFGVVTVICCTSTL 604

  Fly   715 GRGIDVPDIKLVVQ--YTPPQ--TTADFVHRVGRTARA--GRKGRAVLFLTPSEAQFVRH----- 768
            ..|:::|..:::::  |...:  |...:...|||..||  |..|.::|.....:...|..     
  Fly   605 AAGVNLPAKRVIIRAPYVGQEFLTLCKYKQMVGRAGRAGLGEAGESILIAQSKDNLLVGQMLFSP 669

  Fly   769 LEKKRIRIQQGDMYAYLQTLL 789
            ::|....:.|.:... ||:|:
  Fly   670 MDKALSSLDQNEAVG-LQSLI 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8611NP_788922.1 DUF2413 203..>285 CDD:287302 22/115 (19%)
P-loop_NTPase 332..548 CDD:304359 44/222 (20%)
DEXDc 348..554 CDD:214692 40/212 (19%)
HELICc 601..757 CDD:238034 34/172 (20%)
DUF4217 805..866 CDD:290667
mus301NP_648178.1 BRR2 247..998 CDD:224125 99/497 (20%)
DEXHc_POLQ-like 247..449 CDD:350784 49/243 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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