DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8611 and Ddx24

DIOPT Version :9

Sequence 1:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_954550.1 Gene:Ddx24 / 373065 RGDID:727929 Length:851 Species:Rattus norvegicus


Alignment Length:985 Identity:215/985 - (21%)
Similarity:358/985 - (36%) Gaps:337/985 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 KAKPKITRAERLGKKQRQG-KPLTKLSEEQIT-----------------RALKSNKKPKNPNQLP 181
            |:|||  .|.| |..||:| |.:.|.  :|:|                 ..|...:..|||::| 
  Rat     7 KSKPK--SASR-GTFQRKGIKVVGKW--KQVTIDPNLFADGQMDDLVCFEELTDYRLVKNPSRL- 65

  Fly   182 TPGDLFRAQLEEERRQKRREEGGGDQEASADEEDAKNNSGGGSPRVK-----PSSAVKESKKSSD 241
                     ..:|..:||:.     |..|.:||:.:..|.....::|     .:..|.|...:.|
  Rat    66 ---------FSDETTKKRKA-----QAVSEEEEEEEGESSSPKKKIKLKKQRDAILVAEGSAAQD 116

  Fly   242 -----IEDSGESGEESATSDEE----PDESSAQSPGQEKEPK---------QTAKKPPKAEETSS 288
                 ..:.|..||.:..||::    ..||.||:..::|:.|         .||.|.||..:|..
  Rat   117 ECEGKASEPGAQGEITVCSDQKVGGATSESLAQTVPRKKKNKGKKKLDTFQSTAPKVPKKAKTWM 181

  Fly   289 TNRFRTKKIGLFDQ-SDVEALKQLGQRAVKPVKETIFTGSKISTLGLHPHAVKNLEDLLSIRELT 352
            ..        :.|| :||.|.:.|                      ..|.||......|.....|
  Rat   182 PE--------VQDQKADVSAWRDL----------------------FVPKAVLRALSFLGFSAPT 216

  Fly   353 SVQQKTIPEVLQGK-DVLVRSQTGSGKTLAYALPLV-ELLQKQQ-------------PRIQR--- 399
            .:|..|:...::.| |:|..::||||||||:|:|:: .:||..:             ||:..   
  Rat   217 PIQALTLAPAIRDKLDILGAAETGSGKTLAFAIPMIHSVLQWHKMKAPPIPSSAGVPPRLGAAAH 281

  Fly   400 -----KDG--------------------------------------------------------- 402
                 |||                                                         
  Rat   282 RGSPCKDGAKSGVLPEEATIETEAQPSDSGVQATAKAGASAASAQAGLFCDDDAGEGPSSLVEEK 346

  Fly   403 -----------------------------------VLALVIVPTRELVMQTYELIQKLVKPYTWI 432
                                               :|.||:.|||||.:|..:.|..:.| :|.|
  Rat   347 QSKDREEKLDEEQAGKLKQELCDQIAVYKVHPRRPLLGLVLTPTRELAVQVRQHIDAVAK-FTGI 410

  Fly   433 VPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHL--LHTASFKLTKLQFLILDEADRLLELGY 495
            ....|:||.|.:.::..|.:...|:|.|||||.:.:  .|.....|.:|:.|::|||||::|..:
  Rat   411 NTAILVGGMSTQKQQRMLNRHPEIVIATPGRLWELIKEKHPHLSNLRQLRCLVIDEADRMVEKDH 475

  Fly   496 ERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQQLAGLTLKNPLYIDNSDEAASA-AL 559
            ..::.||:|.::      :.:..|..|.::.|||||...|..|.:..|.  ::...|:.|.. .|
  Rat   476 FAELSQLLEMLN------DSQYNPNRQTLVFSATLTLVHQAPARILHKK--HVKKMDKTAKLDLL 532

  Fly   560 KSKDGYQ-----------KETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVAL 613
            ..|.|.:           :.|:|.|.|........::|          |.|.|.::         
  Rat   533 MQKIGMRGKPKVIDLTRNEGTVETLTETKIHCETDEKD----------LYLYYFLM--------- 578

  Fly   614 SSLLAKEVDASPKQF--KAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEQEKGDSDDDGDIPLL 676
                         |:  :::||.::...:.....:|      :|||              .:|| 
  Rat   579 -------------QYPGRSLVFANSISCIKRLSGLL------KVLD--------------IMPL- 609

  Fly   677 QGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYTPPQTTADFVHR 741
                  .||..|.|.:|......|.....||||||||..||:|:|.::.|:.|..|:|:..::||
  Rat   610 ------TLHACMHQKQRLRNLEQFARLEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYIHR 668

  Fly   742 VGRTARAGRKGRAVLFLTPSEAQFVRHLEKKRIRIQQGDMY----AYLQTLLPKDDEARTVQEAA 802
            .||||||..:|.:::.:.|.:....:.:.|...:.:...::    .|:..:..:...||.:::|.
  Rat   669 SGRTARATSEGLSLMLIGPEDVINFKKIYKTLKKDEDIPLFPVQSKYMDMVKERIRLARQIEKAE 733

  Fly   803 SNLQHKFQTLLED----------DRELHDKSCKAFVSWMKFYSTFPKELKPIFNVRIAHMGHFAK 857
               ...||..|.:          :.||.::..|...:..:......|::| |....:.|:     
  Rat   734 ---YRNFQACLHNSWIEQAAAALEIELEEEMYKGGKADQQEERRRQKQMK-ILKQELRHL----- 789

  Fly   858 SFALKEAPSKFAAKHAAPKAAPPTNRLTYTERDPEKIQAQKRAKRRFTTTVSGEVRQLQQRDVGA 922
               |.:...:...|...|         |.:.|.|:.:.    |.|...:.:|...||.::|    
  Rat   790 ---LSQPLFQENLKTRYP---------TQSGRPPQPVV----APRNVESALSCLSRQKRRR---- 834

  Fly   923 QKP---GAPP 929
            :||   .|||
  Rat   835 KKPKEHQAPP 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8611NP_788922.1 DUF2413 203..>285 CDD:287302 25/104 (24%)
P-loop_NTPase 332..548 CDD:304359 75/332 (23%)
DEXDc 348..554 CDD:214692 72/322 (22%)
HELICc 601..757 CDD:238034 41/157 (26%)
DUF4217 805..866 CDD:290667 11/70 (16%)
Ddx24NP_954550.1 SrmB 191..735 CDD:223587 137/636 (22%)
P-loop_NTPase 194..505 CDD:304359 71/339 (21%)
Helicase_C 567..675 CDD:278689 41/166 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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