DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8611 and Hel25E

DIOPT Version :9

Sequence 1:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster


Alignment Length:507 Identity:123/507 - (24%)
Similarity:218/507 - (42%) Gaps:111/507 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 DQSDVEALKQLGQRAVK----PVKETIFTGSKISTLG-----LHPHAVKNLEDLLSIRELTSVQQ 356
            |..|.|..:|....||:    |.|:...|...|.:.|     |.|..::.:.| ......:.||.
  Fly     6 DLLDYEDEEQTETTAVENQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVD-CGFEHPSEVQH 69

  Fly   357 KTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYEL 421
            :.||:.:.|.|:|.::::|.|||..:.|   ..||:.:|.......|  ||:..||||..|..:.
  Fly    70 ECIPQAVLGMDILCQAKSGMGKTAVFVL---ATLQQLEPSDNNTCHV--LVMCHTRELAFQISKE 129

  Fly   422 IQKLVKPYTWIVPGSLLGGESRKSEKARLRKGI-NILIGTPGRLVDHLLHTASFKLTKLQFLILD 485
            .::..|....:......||.:.:.::..|:.|. :|::|||||:: .|:......|..|:..:||
  Fly   130 YERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRIL-ALIRNKKLNLKLLKHFVLD 193

  Fly   486 EADRLLE-LGYERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQQLAGLTLKNPLYID 549
            |.|::|| |...|||:::..:....:           |.|:.||||:..::.:....:::|:.:.
  Fly   194 ECDKMLEQLDMRRDVQEIFRSTPHGK-----------QVMMFSATLSKDIRPVCKKFMQDPMEVY 247

  Fly   550 NSDEAASAALKSKDGY----QKETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRL 610
            ..|||.......:..|    :.|..:.|.|:.|.| |:.:.|..|.|:.              |.
  Fly   248 VDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVL-EFNQVVIFVKSVQ--------------RC 297

  Fly   611 VALSSLLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEQEKGDSDDDGDIPL 675
            ||||.||.::      .|.||                                            
  Fly   298 VALSQLLTEQ------NFPAI-------------------------------------------- 312

  Fly   676 LQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYTPPQTTADFVH 740
                   .:|..|||.||...::.|:|....:|:||::.|||:|:..:.:|..|..|:.:..::|
  Fly   313 -------GIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLH 370

  Fly   741 RVGRTARAGRKGRAVLFLT-PSEAQFVRHLEKK-RIRI----QQGDMYAYLQ 786
            ||.|..|.|.||.|:.|:: .::|:.:..::.: .:.|    ::.|:..|::
  Fly   371 RVARAGRFGTKGLAITFVSDENDAKILNEVQDRFDVNISELPEEIDLSTYIE 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8611NP_788922.1 DUF2413 203..>285 CDD:287302
P-loop_NTPase 332..548 CDD:304359 58/222 (26%)
DEXDc 348..554 CDD:214692 55/207 (27%)
HELICc 601..757 CDD:238034 37/155 (24%)
DUF4217 805..866 CDD:290667
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 58/225 (26%)
SF2_C_DEAD 259..388 CDD:350174 47/200 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451349
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.