DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8611 and Dbp80

DIOPT Version :9

Sequence 1:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster


Alignment Length:628 Identity:128/628 - (20%)
Similarity:226/628 - (35%) Gaps:217/628 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 SKKSSDIEDS---------GESGEESATSDEEPDESSAQSPGQEKEPKQTAKKPPKAEETSSTNR 291
            :||:.|.|.|         .:||||:.....:|.|:|.                           
  Fly     5 AKKAEDQEVSKLVDKLNLDSKSGEETDFDVADPAETSL--------------------------- 42

  Fly   292 FRTKKIGLFDQSDVEALKQLGQRAVKPVKETIFTGSKISTLGLHP----HAVKNLEDL------- 345
                           .:|.||       |..:.|...:.....:|    |:||..|.|       
  Fly    43 ---------------LIKILG-------KGLVNTKLSLDIQQKNPNSPLHSVKTFEALHLKASLL 85

  Fly   346 -----LSIRELTSVQQKTIPEVLQG--KDVLVRSQTGSGKTLAYALPLVELLQ--KQQPRIQRKD 401
                 :.....:.:|:..:|.:|..  ::::.:||:|:|||.|:.|.::..:.  ...|::    
  Fly    86 KGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVNVCLNHPQV---- 146

  Fly   402 GVLALVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLGGE----SRKSEKARLRKGINILIGTPG 462
                |.:.||.||.:||.|:..::.:....|.....:.||    |:|.|:       :|||||||
  Fly   147 ----LCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEVDRSKKIEE-------HILIGTPG 200

  Fly   463 RLVDHLLHTASFKLTKLQFLILDEADRLLEL-GYERDVKQLVEAIDKQRAECEDKELPQLQRMLL 526
            :|:|..:....|.:.|:...:|||||.::.. |:.....::.:.::           |..|.:..
  Fly   201 KLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRIHKMLN-----------PHCQMLFF 254

  Fly   527 SATLTSQVQQLAGLTLKNPLYIDNSDEAASAALKSKDGYQKETIEAL----LEVDDGLGEYQ--E 585
            |||...:|...|.|.:.:|..|....|             :|::|.:    ::..:..|:|.  :
  Fly   255 SATYGKEVMDFARLIVADPTIIRLMRE-------------EESLENIKQYYVKCKNEEGKYNAIQ 306

  Fly   586 DVTGVLSIPENLQLSYVVVPPKLRLVALSSLLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLNEA 650
            ::.|.:|:.:                                  ||:|..|.....:    |...
  Fly   307 NIYGCISVGQ----------------------------------AIIFCHTKRTAAW----LAAK 333

  Fly   651 LTRRVLDEEDEQEKGDSDDDGDIPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVG 715
            :|              ||         |.....|.|.:|..:|..|...||.....||:.|:::.
  Fly   334 MT--------------SD---------GHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITTNILS 375

  Fly   716 RGIDVPDIKLVVQYTPP---QTTAD---FVHRVGRTAR------------------AGRKGRAVL 756
            ||||:..:.:||.:..|   ...||   ::||:|||.|                  :|:.|:.:.
  Fly   376 RGIDIEQVTIVVNFDLPVDLDGMADCETYLHRIGRTGRFEPSALTRNSPIFGVKAESGKIGKEIN 440

  Fly   757 FLTPSEAQFVRHLEKKRIRIQQGDMYAYLQTLLPKDDEARTVQ 799
            ..:.......|.:.|::..|.....::....|    |||..||
  Fly   441 RSSSGAESGSREMPKEKENISLLKFFSLTGNL----DEAWDVQ 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8611NP_788922.1 DUF2413 203..>285 CDD:287302 12/57 (21%)
P-loop_NTPase 332..548 CDD:304359 58/240 (24%)
DEXDc 348..554 CDD:214692 53/214 (25%)
HELICc 601..757 CDD:238034 36/179 (20%)
DUF4217 805..866 CDD:290667
Dbp80NP_001263168.1 DEADc 75..277 CDD:238167 54/227 (24%)
DEXDc 88..291 CDD:214692 56/241 (23%)
Helicase_C 299..414 CDD:278689 37/175 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451508
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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