DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8611 and Hlc

DIOPT Version :9

Sequence 1:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001285517.1 Gene:Hlc / 33118 FlyBaseID:FBgn0001565 Length:560 Species:Drosophila melanogaster


Alignment Length:639 Identity:157/639 - (24%)
Similarity:272/639 - (42%) Gaps:141/639 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 QLGQRAVKPVKETIFTGSKISTLGLHPHAVKNLEDLLSIRELTSVQQKTIPEVLQGKDVLVRSQT 374
            :|.||.:|.|.:                        |..::.|.:|...||.:|:||||:||::|
  Fly    15 ELDQRILKAVAQ------------------------LGWQQPTLIQSTAIPLLLEGKDVVVRART 55

  Fly   375 GSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLG 439
            |||||..|||||::.:...:.... :..|.|:|:.||:||..|:.::|::||:....:|..:.:.
  Fly    56 GSGKTATYALPLIQKILNSKLNAS-EQYVSAVVLAPTKELCRQSRKVIEQLVESCGKVVRVADIA 119

  Fly   440 GESRK--SEKARLRKGINILIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLELGYERDVKQL 502
            ..|..  :::..|.:..:|::.||..|:.:....:...|..::.|::||||.:...|||:|.|:|
  Fly   120 DSSNDTVTQRHALSESPDIVVATPANLLAYAEAGSVVDLKHVETLVVDEADLVFAYGYEKDFKRL 184

  Fly   503 VEAIDKQRAECEDKELPQL-QRMLLSATLTSQVQQLAGLTLKNPLYIDNSDEAASAALKSKDGYQ 566
            :            |.||.: |.:|:|||||..|.::.||.|.||:.:    :.....|..:|...
  Fly   185 I------------KHLPPIYQAVLVSATLTDDVVRMKGLCLNNPVTL----KLEEPELVPQDQLS 233

  Fly   567 KETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVALSSLLAKEVDASPKQFKAI 631
            .:.|         |.| :.|...:|         |.::  ||||:...|::.  |::..:.:|..
  Fly   234 HQRI---------LAE-ENDKPAIL---------YALL--KLRLIRGKSIIF--VNSIDRCYKVR 275

  Fly   632 VFMSTTEMVNFHHDMLNEALTRRV-LDEEDEQEKGDSDDDGDIPLLQGLRFFKLHGSMTQTERQG 695
            :|:   |.......:||..|...: :....:..||..    ||.:.......:..|..:.|.|:.
  Fly   276 LFL---EQFGIRACVLNSELPANIRIHTISQFNKGTY----DIIIASDEHHMEKPGGKSATNRKS 333

  Fly   696 VFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYTPPQTTADFVHRVGRTARAGRKGRAVLFLTP 760
            ...|..:.::         .||||...:..|:.:..|:....::||.|||||...||..:.|::.
  Fly   334 PRSGDMESSA---------SRGIDFQCVNNVINFDFPRDVTSYIHRAGRTARGNNKGSVLSFVSM 389

  Fly   761 SEAQFVRHLEKK---------------------------RIRIQQGDMYAYLQTLLPKDDEARTV 798
            .|::....:|||                           |.|.|  |.:.....:...|...|.:
  Fly   390 KESKVNDSVEKKLCDSFAAQEGEQIIKNYQFKMEEVESFRYRAQ--DCWRAATRVAVHDTRIREI 452

  Fly   799 QEAASNLQHKFQTLLEDD-REL----HDKSCKAF-----VSWMKFYSTFPKELKPIFNVRIAHMG 853
            :....|.: |.:...|:: |:|    |||..:|.     :|.|..| ..||.||.:       :|
  Fly   453 KIEILNCE-KLKAFFEENKRDLQALRHDKPLRAIKVQSHLSDMPEY-IVPKALKRV-------VG 508

  Fly   854 HFAKSFALKEA--PSKFAAKHAAPKAAPP---TNRLTYTERDPEKIQAQKRAKR 902
            ..:......||  |.:.|||.|..:....   .:::.:.:|.|    |.:|.|:
  Fly   509 TSSSPVGASEAKQPRQSAAKAAFERQVNDPLMASQVDFGKRRP----AHRRKKK 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8611NP_788922.1 DUF2413 203..>285 CDD:287302
P-loop_NTPase 332..548 CDD:304359 69/218 (32%)
DEXDc 348..554 CDD:214692 68/208 (33%)
HELICc 601..757 CDD:238034 36/156 (23%)
DUF4217 805..866 CDD:290667 18/72 (25%)
HlcNP_001285517.1 P-loop_NTPase 11..220 CDD:304359 74/245 (30%)
DEXDc 24..231 CDD:214692 71/247 (29%)
HELICc 234..386 CDD:238034 41/190 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451626
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.040

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