DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8611 and ddx55

DIOPT Version :9

Sequence 1:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_775336.2 Gene:ddx55 / 286745 ZFINID:ZDB-GENE-021212-1 Length:593 Species:Danio rerio


Alignment Length:653 Identity:173/653 - (26%)
Similarity:281/653 - (43%) Gaps:145/653 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   334 LHPHAVKNLEDLLSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQ 398
            ||.:.::.|:: |....:|.||...||..:..|||...:.||||||||:.:|.:|:|.|::.:: 
Zfish    16 LHDNILQTLKE-LGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPALEILLKREEKL- 78

  Fly   399 RKDGVLALVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLR-KGINILIGTPG 462
            :|..|.||:|.|||||.||..|::.:.::.:.......|:||.:...:..:|: :|.||:|.|||
Zfish    79 KKMQVGALIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNPIEDVEKLKTQGANIIIATPG 143

  Fly   463 RLVDHLLHTA-----SFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQ 522
            ||.|.....|     :..:..|..|:||||||||::|:|..:..::..:.|||           :
Zfish   144 RLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQR-----------R 197

  Fly   523 RMLLSATLTSQVQQLAGLTLKNPLYIDNSDEAASAALKSKDGYQKETIEALLEVDDGLGEYQEDV 587
            ..|.|||.|.::::|....|:||:.|...::..:|                              
Zfish   198 TGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAA------------------------------ 232

  Fly   588 TGVLSIPENLQLSYVVVPPKLRLVALSSLLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLNEALT 652
            :.|...|..|...|.:...:.:...|.:.|.:.     |..|.:||.||...|.:....| |.|.
Zfish   233 SSVQKTPAKLSNYYTMCRAEEKFNTLVAFLRQH-----KHEKQLVFFSTCACVEYFGKAL-EVLV 291

  Fly   653 RRVLDEEDEQEKGDSDDDGDIPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRG 717
            :.|                        ....:||.| :.:|..:|..||...|.:|:.|||:.||
Zfish   292 KNV------------------------SIHCIHGKM-KHKRNKIFADFRALKSGILVCTDVMARG 331

  Fly   718 IDVPDIKLVVQYTPPQTTADFVHRVGRTARAGRKGRAVLFLTPSEAQFVRHLE-KKRIRIQQGDM 781
            ||:|::..|:||.||.:.:.||||.|||||.|.:|.|::||.|.|..:|..|. .::..:|....
Zfish   332 IDIPEVNWVLQYDPPSSASSFVHRCGRTARIGNQGNALVFLLPMEESYVNFLSINQKCPLQSFSS 396

  Fly   782 YAYLQTLLPKDDEARTVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFPKELKPIFN 846
            ...:..:||                 |.:.:...||.:.:|..:||||:::.|:  ..|...||.
Zfish   397 VKDVVDVLP-----------------KLKAMALGDRAMFEKGMRAFVSYVQAYA--KHECSLIFR 442

  Fly   847 VRIAHMGHFAKSFALKEAPSKFAAKHAAPKAAPPTNRLTYTERDPEKIQA-------QKRAKRRF 904
            ::.......|:.|||...|.           .|.....|:.:...|.|..       :.|.|:| 
Zfish   443 IKDLDFAALARGFALVRLPK-----------MPELRGKTFPDFKAEAIDTDTIRFKDKNREKQR- 495

  Fly   905 TTTVSGEVRQLQQRDVGAQKPGAPPPKGGFIGGGVGRSSFMKSLGKSRALNMSEFDSGLPPEGAA 969
                        |:.:..||....|.:..||              |::|.:..:.......:.|:
Zfish   496 ------------QKWLAEQKEKEVPLRKNFI--------------KNKAWSKQKIKKDRKKKRAS 534

  Fly   970 KRR 972
            ||:
Zfish   535 KRK 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8611NP_788922.1 DUF2413 203..>285 CDD:287302
P-loop_NTPase 332..548 CDD:304359 76/219 (35%)
DEXDc 348..554 CDD:214692 73/211 (35%)
HELICc 601..757 CDD:238034 48/155 (31%)
DUF4217 805..866 CDD:290667 16/60 (27%)
ddx55NP_775336.2 Q motif 9..37 6/21 (29%)
SrmB 15..517 CDD:223587 169/631 (27%)
DEADc 16..224 CDD:238167 76/220 (35%)
DEAD box 171..174 2/2 (100%)
Helicase_C 252..363 CDD:278689 44/141 (31%)
DUF4217 403..462 CDD:290667 18/77 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 569..593
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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