DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8611 and ddx24

DIOPT Version :9

Sequence 1:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster
Sequence 2:XP_002933278.2 Gene:ddx24 / 100490359 XenbaseID:XB-GENE-983004 Length:794 Species:Xenopus tropicalis


Alignment Length:891 Identity:198/891 - (22%)
Similarity:322/891 - (36%) Gaps:313/891 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 TTKPVVAQKAKPKITRAERLGKKQRQG-------KPLT---------KLSE----EQIT--RALK 169
            |.|.....|.:||:         |.:|       ||:.         ||.|    |::|  ..:|
 Frog     3 TQKQKSRMKFRPKV---------QNKGIKITGKWKPVALDPNLFADEKLDEIVCFEELTDYELVK 58

  Fly   170 SNKKPKNPNQLPTPGDL-FRAQLEEERRQKRREEGGGDQEASADEEDAKNNSGGGSPRVKPSSAV 233
            |:|:.|...:....|:: .:::.|...:.|:|:               |.|:...:.:|....|:
 Frog    59 SSKELKKGVKRTHAGEVEIKSESEHVVKSKKRK---------------KQNAALAAQKVDEEDAL 108

  Fly   234 KESKKSSDIEDSGESGEESATSDEEPDESSAQSPGQEKEPKQTAKKPPKAEE------------- 285
            .|.:...:..|.|...|::. .|...|:.|.|...::|..|:..||....::             
 Frog   109 PEMEDEPENFDMGVQSEDNG-EDVTKDQFSQQLKSKKKREKRKKKKNTSVQKDAPAPHSVKKSKN 172

  Fly   286 --------TSSTNRFRTKKIGLFDQSDVEALKQLGQRAVKPVKETIFTGSKISTLGLHPHAVKNL 342
                    |||.|            .||.|.|.|                      ..|..|...
 Frog   173 WSENALANTSSKN------------VDVSAWKNL----------------------YVPQVVLKA 203

  Fly   343 EDLLSIRELTSVQQKTIPEVLQGK-DVLVRSQTGSGKTLAYALPLVELLQKQQPRIQ-------- 398
            ...|.....|.:|...:|..::.| |:|..::||||||||:|:|::..:.:.|.|.:        
 Frog   204 LSYLGFACPTPIQALALPSAIRDKMDILGAAETGSGKTLAFAIPMIHSILEWQKRQEYGAAEGET 268

  Fly   399 -----RKDG-------------------------------------------------------- 402
                 ..||                                                        
 Frog   269 EEKPTTSDGKNEMDVAEKEEQDMSENEEDVEQVDDNVEPLSAACINVENIDINVNAVPSSKTGTW 333

  Fly   403 -----VLALVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPG 462
                 :|.||:.|||||.:|....|..:.| :|.|....::||.:.:.::..|.:...|:|.|||
 Frog   334 DKERPLLGLVVTPTRELAVQVKHHIDAVAK-FTGIRTAIVVGGMAPQKQQRLLDRRPEIVIATPG 397

  Fly   463 RLVDHL--LHTASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQRML 525
            ||.:.:  .|.....|.:|:.|::|||||::|.|:..::.||.|.:.:....      .:.|..:
 Frog   398 RLWELIRERHPHLRNLRQLRCLVIDEADRMVEKGHYAELSQLFELLSEVHYN------SKRQTFV 456

  Fly   526 LSATLTSQVQQLAGLTLKNPLY--IDNSDEAAS----AALKSK----DGYQKE-TIEALLEVDDG 579
            .||||| .:.|.....|:...|  ||...:..|    ..:|.|    |..:|: |:|.|.|....
 Frog   457 FSATLT-LIHQAPTRLLQKKKYKKIDKDSKLVSLMEKIGMKDKPKVIDLTRKQATVETLTETRIH 520

  Fly   580 LGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVALSSLLAKEVDASPKQF--KAIVFMSTTEMVNF 642
            ....::|          ..|.|.::                      |:  :.:||.::.:.:. 
 Frog   521 CATEEKD----------FYLYYFLL----------------------QYPGRTMVFANSIDCIK- 552

  Fly   643 HHDMLNEALTRRVLDEEDEQEKGDSDDDGDIPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCV 707
               .|:..||  :||..              ||       .:|.:|.|.:|......|.:..|||
 Frog   553 ---RLSSLLT--ILDCN--------------PL-------PMHANMHQKQRLKNLERFAERESCV 591

  Fly   708 LLATDVVGRGIDVPDIKLVVQYTPPQTTADFVHRVGRTARAGRKGRAVLFLTPSE----AQFVRH 768
            ||.|||..||:|:|:::.|:.|..|:|:..:|||.||||||...|..:|.:.|::    .:..|.
 Frog   592 LLTTDVAARGLDIPNVQHVIHYQVPRTSETYVHRSGRTARASSDGLTLLLIGPNDMINFKKIFRT 656

  Fly   769 LEKK----------------RIRIQQGDMYAYLQTLLPKDDEART-VQEAASNL----------- 805
            |||.                :.|:....|...::....|..:..: :|:||..|           
 Frog   657 LEKNEELPDFPVESKCMSGIKERVNLARMIEKMEYFNCKAKQQNSWLQQAAEALELDLDDDVLVG 721

  Fly   806 -QHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFPKELK-----PIF 845
             ||.     |::..:..||.|.    ||      |:||     |||
 Frog   722 GQHN-----EEEERVKQKSLKI----MK------KQLKQLLSQPIF 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8611NP_788922.1 DUF2413 203..>285 CDD:287302 16/81 (20%)
P-loop_NTPase 332..548 CDD:304359 69/294 (23%)
DEXDc 348..554 CDD:214692 68/284 (24%)
HELICc 601..757 CDD:238034 42/157 (27%)
DUF4217 805..866 CDD:290667 15/58 (26%)
ddx24XP_002933278.2 DEADc_DDX24 200..503 CDD:350704 73/310 (24%)
SF2_C_DEAD 514..642 CDD:350174 47/186 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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