DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and HB-2

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_193411.1 Gene:HB-2 / 827384 AraportID:AT4G16780 Length:284 Species:Arabidopsis thaliana


Alignment Length:221 Identity:55/221 - (24%)
Similarity:90/221 - (40%) Gaps:46/221 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 PPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGK----DDDGNSVKSGSTSDMSGLSKKQRKA 302
            ||:      :::|.:|:....|.|   .:|.|:.||    ::|.:...|...||.......::|.
plant    76 PPS------TAEYGDEDAGVSSPN---STVSSSTGKRSEREEDTDPQGSRGISDDEDGDNSRKKL 131

  Fly   303 RTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWK-RQTAVGLELL- 365
            |  .:..|...||::|:....|:.:::|.||.:|.|...||:.|:||||.:.| :||.|..|.| 
plant   132 R--LSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLR 194

  Fly   366 --------------AEAGNFAAFQRLYGGSP--YLGAWP---YAAAAGAAHGATPHTNIDIYYRQ 411
                          .|.....|.:.    ||  |:...|   ........|.:.|..      :.
plant   195 RCCENLTEENRRLQKEVTELRALKL----SPQFYMHMSPPTTLTMCPSCEHVSVPPP------QP 249

  Fly   412 AAAAAAMQKPLPYNLYAGVPSVGVGV 437
            .||.:|..:.||.|.:|....:..|:
plant   250 QAATSAHHRSLPVNAWAPATRISHGL 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 20/56 (36%)
HB-2NP_193411.1 HD-ZIP_N 8..107 CDD:461370 10/39 (26%)
HOX 128..182 CDD:197696 19/55 (35%)
HALZ 184..227 CDD:128634 10/46 (22%)

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