DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and HB4

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_182018.1 Gene:HB4 / 819100 AraportID:AT2G44910 Length:318 Species:Arabidopsis thaliana


Alignment Length:291 Identity:65/291 - (22%)
Similarity:108/291 - (37%) Gaps:89/291 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 RFMINDILAGSAAAAFYKQQQHHQQLHHHNNNNNSGSSGGSSPAHSNNNNNINGDNCEASNVAGV 140
            |..:..:...|::::|       |.:|:.|||::.......|..|...::.|.....|.::.|| 
plant    25 RLNLMPLTTSSSSSSF-------QHMHNQNNNSHPQKIHNISWTHLFQSSGIKRTTAERNSDAG- 81

  Fly   141 GVLPSALHHPQPHPPTHPHTHPHALMHPHGKLGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAA 205
                |.|                                  .|.||.:          |.::.|.
plant    82 ----SFL----------------------------------RGFNVNR----------AQSSVAV 98

  Fly   206 ARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHS 270
            ......||..::..:|.:.::....|        ||...|||.:::     |...|..|.     
plant    99 VDLEEEAAVVSSPNSAVSSLSGNKRD--------LAVARGGDENEA-----ERASCSRGG----- 145

  Fly   271 VCSNGGKDDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHK 335
              .:||.||:     .|...|  |..||.|.::     .|...||::|:....|:.:::..||.:
plant   146 --GSGGSDDE-----DGGNGD--GSRKKLRLSK-----DQALVLEETFKEHSTLNPKQKLALAKQ 196

  Fly   336 LDLSDCQVKTWYQNRRTKWK-RQTAVGLELL 365
            |:|...||:.|:||||.:.| :||.|..|.|
plant   197 LNLRARQVEVWFQNRRARTKLKQTEVDCEYL 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 18/56 (32%)
HB4NP_182018.1 HD-ZIP_N 8..124 CDD:461370 24/154 (16%)
Homeodomain 162..216 CDD:459649 19/58 (33%)
HALZ 218..261 CDD:128634 5/10 (50%)

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