DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment B-H1 and lbx1b

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001156784.1 Gene:lbx1b / 793810 ZFINID:ZDB-GENE-050309-27 Length:265 Species:Danio rerio


Alignment Length:116 Identity:48/116 - (41%)
Similarity:61/116 - (52%) Gaps:24/116 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 KKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQ---- 357
            ||:||:|||||:|||..|||.|..|||||..:|.::||:|.|::.||.||:||||.|.||.    
Zfish   119 KKRRKSRTAFTNHQLYELEKRFLHQKYLSPADRDQIAHQLGLTNAQVITWFQNRRAKLKRDLEEM 183

  Fly   358 -------TAVGLELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHGATP 401
                   .:.||..|.:....|..:|             .|||||.....|
Zfish   184 KADVESVRSTGLVPLDKLAKLADLER-------------CAAAGATGNPGP 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 33/55 (60%)
lbx1bNP_001156784.1 Homeodomain 122..178 CDD:459649 33/55 (60%)

Return to query results.
Submit another query.