DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Nkx1-1

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_035450.1 Gene:Nkx1-1 / 672284 MGIID:109346 Length:440 Species:Mus musculus


Alignment Length:470 Identity:124/470 - (26%)
Similarity:156/470 - (33%) Gaps:160/470 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 SNVAGVGVLPSALHHPQPHP-----PTHPHTHPHALMHPHGKLGHFPPTAGGNGLNVAQYAAAMQ 194
            |..|..|.:| ||..|.|.|     |..|.......|....:|..| |.||...|..:....|:.
Mouse     4 SGPAAPGDVP-ALPPPPPGPGSGPAPPAPAATARDTMDGRAELPIF-PRAGVPPLAASDTVPAVP 66

  Fly   195 QHYAAAAAAAAARNNA------------------------AAAAAAAAAAAAAGVAAPPVDG--- 232
            :...||..||..|..:                        ...|..|..|.||.||.|...|   
Mouse    67 EGAGAARPAAPPRPTSFSVLDILDPNKFNSRRRRCVLLGPVVPATCAPCAPAACVAVPAASGRSP 131

  Fly   233 -------------GVDGGVGLAPPAGGD--------------------LDDSSDYHEENED---- 260
                         ||....|..|.:.||                    ..||.|...|:||    
Mouse   132 RAELERRALSAATGVAAAAGAEPTSAGDSYRADEAEANGYSSGSGRSPTADSEDEAPEDEDEEEA 196

  Fly   261 -------------------------C------DSGNMDDHSV-------------------CSNG 275
                                     |      ::..:||.:.                   ..:.
Mouse   197 PEVQDAQGTEEPRGGSGGLGARGSGCPGAAEVEASPVDDTAAPGPRGNSPGAPGPPATATGAGSA 261

  Fly   276 GKDDDGNSV-------KSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELA 333
            |....|.:|       ::||.|.    |.|.|:||||||..||..||..|:..:||||.||..||
Mouse   262 GSTPQGAAVTTKPKRKRTGSDSK----SGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLA 322

  Fly   334 HKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHG 398
            ..|.|::.|||.|:||||||||:|.. |.:..|..|.        ||.|..||.|   .||...|
Mouse   323 LSLSLTETQVKIWFQNRRTKWKKQNP-GADTSAPTGG--------GGGPGPGAGP---GAGLPGG 375

  Fly   399 ATPHTNIDIYYRQAAAAAAMQKPLPYNLYAGVPSVGVGVGVGVGPAPFSHLSASSSLSSLSSYYQ 463
            .:|          .:.:..|..||..:..||.|:...|..|.....||  ||:.:.||......|
Mouse   376 LSP----------LSPSPPMGAPLALHGPAGYPAHSPGGLVCAAQLPF--LSSPAVLSPFVLGSQ 428

  Fly   464 SAAAAASAANPGGPH 478
            :..|.|..|    ||
Mouse   429 TYGAPAFYA----PH 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 33/55 (60%)
Nkx1-1NP_035450.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82 24/79 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..291 24/149 (16%)
Homeodomain 289..345 CDD:459649 33/55 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..387 18/66 (27%)

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