DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Nkx1-1

DIOPT Version :9

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_035450.1 Gene:Nkx1-1 / 672284 MGIID:109346 Length:440 Species:Mus musculus


Alignment Length:470 Identity:124/470 - (26%)
Similarity:156/470 - (33%) Gaps:160/470 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 SNVAGVGVLPSALHHPQPHP-----PTHPHTHPHALMHPHGKLGHFPPTAGGNGLNVAQYAAAMQ 194
            |..|..|.:| ||..|.|.|     |..|.......|....:|..| |.||...|..:....|:.
Mouse     4 SGPAAPGDVP-ALPPPPPGPGSGPAPPAPAATARDTMDGRAELPIF-PRAGVPPLAASDTVPAVP 66

  Fly   195 QHYAAAAAAAAARNNA------------------------AAAAAAAAAAAAAGVAAPPVDG--- 232
            :...||..||..|..:                        ...|..|..|.||.||.|...|   
Mouse    67 EGAGAARPAAPPRPTSFSVLDILDPNKFNSRRRRCVLLGPVVPATCAPCAPAACVAVPAASGRSP 131

  Fly   233 -------------GVDGGVGLAPPAGGD--------------------LDDSSDYHEENED---- 260
                         ||....|..|.:.||                    ..||.|...|:||    
Mouse   132 RAELERRALSAATGVAAAAGAEPTSAGDSYRADEAEANGYSSGSGRSPTADSEDEAPEDEDEEEA 196

  Fly   261 -------------------------C------DSGNMDDHSV-------------------CSNG 275
                                     |      ::..:||.:.                   ..:.
Mouse   197 PEVQDAQGTEEPRGGSGGLGARGSGCPGAAEVEASPVDDTAAPGPRGNSPGAPGPPATATGAGSA 261

  Fly   276 GKDDDGNSV-------KSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELA 333
            |....|.:|       ::||.|.    |.|.|:||||||..||..||..|:..:||||.||..||
Mouse   262 GSTPQGAAVTTKPKRKRTGSDSK----SGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLA 322

  Fly   334 HKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHG 398
            ..|.|::.|||.|:||||||||:|.. |.:..|..|.        ||.|..||.|   .||...|
Mouse   323 LSLSLTETQVKIWFQNRRTKWKKQNP-GADTSAPTGG--------GGGPGPGAGP---GAGLPGG 375

  Fly   399 ATPHTNIDIYYRQAAAAAAMQKPLPYNLYAGVPSVGVGVGVGVGPAPFSHLSASSSLSSLSSYYQ 463
            .:|          .:.:..|..||..:..||.|:...|..|.....||  ||:.:.||......|
Mouse   376 LSP----------LSPSPPMGAPLALHGPAGYPAHSPGGLVCAAQLPF--LSSPAVLSPFVLGSQ 428

  Fly   464 SAAAAASAANPGGPH 478
            :..|.|..|    ||
Mouse   429 TYGAPAFYA----PH 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeobox 303..355 CDD:278475 30/51 (59%)
Nkx1-1NP_035450.1 Homeobox 292..344 CDD:278475 30/51 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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