DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and vent

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_571775.1 Gene:vent / 64810 ZFINID:ZDB-GENE-010108-2 Length:170 Species:Danio rerio


Alignment Length:151 Identity:46/151 - (30%)
Similarity:64/151 - (42%) Gaps:46/151 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 RNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSV 271
            :...:.||..|...||||....|           |.||..                         
Zfish    18 QEKCSTAAPGAPLTAAAGAGKAP-----------ASPANS------------------------- 46

  Fly   272 CSNGGKDDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKL 336
            |.....:.|.:.|::|          :.|:.||.||..|:..|||||.:.:||...:|:::|.||
Zfish    47 CGYTDVESDDSEVEAG----------QNRRVRTKFTCDQISGLEKSFSKHRYLGATQRRKIAEKL 101

  Fly   337 DLSDCQVKTWYQNRRTKWKRQ 357
            .||:.|||||:||||.|.||:
Zfish   102 HLSETQVKTWFQNRRMKLKRE 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 29/55 (53%)
ventNP_571775.1 Homeodomain 65..121 CDD:459649 29/55 (53%)

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