DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and hmx3a

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_571709.3 Gene:hmx3a / 60310 ZFINID:ZDB-GENE-001020-1 Length:297 Species:Danio rerio


Alignment Length:263 Identity:75/263 - (28%)
Similarity:106/263 - (40%) Gaps:69/263 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 AAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAGGDLDDSSDY 254
            |:|....|..:|:|...|..||..|..::........:|.:....|      |.|..|.||:...
Zfish    76 ASAWWYPYTLSASAHLHRTEAAQKARDSSPTTGTDRDSPELVLKSD------PDAKDDEDDNKSG 134

  Fly   255 HE---ENEDCD----SGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQ 312
            .|   |..|.:    .|::||..      |.|||        :|.....||  |.||.|:..|:.
Zfish   135 DEIVLEESDTEDGKKEGSIDDWK------KSDDG--------ADKKPCRKK--KTRTVFSRSQVF 183

  Fly   313 TLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNFAAFQRL 377
            .||.:|:.::|||..||..||..|.|::.|||.|:||||.|||||.|..||              
Zfish   184 QLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLAAELE-------------- 234

  Fly   378 YGGSPYLGAWPYAAAAGAAHGATPH-TNIDIYYRQAAAAAA--------MQKPL---PYNLYAGV 430
                          ||..:|.|... ..:.|.|.:.:|:.:        :.:||   |:.:|...
Zfish   235 --------------AANLSHAAAQRIVRVPILYHENSASESTNTAGNVPVSQPLLTFPHPVYYSH 285

  Fly   431 PSV 433
            |.|
Zfish   286 PIV 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 27/55 (49%)
hmx3aNP_571709.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..43
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..172 23/97 (24%)
Blue background indicates that the domain is not in the aligned region.

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