DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and hoxb6b

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_571613.1 Gene:hoxb6b / 58053 ZFINID:ZDB-GENE-000823-7 Length:224 Species:Danio rerio


Alignment Length:222 Identity:58/222 - (26%)
Similarity:91/222 - (40%) Gaps:49/222 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 THPHALMHPHGK---LGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAAAAAAAAA 221
            |.|.:|  |.|:   ||..|..:.|       |..:: :||.:|...|....:....::....| 
Zfish     9 TFPVSL--PGGQESFLGQIPLYSSG-------YTDSL-RHYPSATFGATNVQDKVYTSSYYQQA- 62

  Fly   222 AAGVAAPPVDGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSV---------CSNGG- 276
                      |||.|..|  ..:..|....:.|...:..|..|:::|..|         |:..| 
Zfish    63 ----------GGVFGRSG--STSACDYSTPNIYRSADRSCAIGSLEDSLVLTQDQCKTDCTEQGT 115

  Fly   277 ------KDDDGNSV-----KSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQ 330
                  :|.....|     :..|.:.|.|  ...|:.|..:|..|...|||.|...:||:.:.|.
Zfish   116 ERYFSTEDKPCTPVYPWMQRMNSCNGMPG--STGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRI 178

  Fly   331 ELAHKLDLSDCQVKTWYQNRRTKWKRQ 357
            |::|.|.|::.|:|.|:||||.|||::
Zfish   179 EISHALCLTERQIKIWFQNRRMKWKKE 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 24/55 (44%)
hoxb6bNP_571613.1 Antp-type hexapeptide 129..134 1/4 (25%)
Homeodomain 148..204 CDD:459649 24/55 (44%)

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