DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and hoxb5b

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_571612.2 Gene:hoxb5b / 58052 ZFINID:ZDB-GENE-000823-6 Length:276 Species:Danio rerio


Alignment Length:314 Identity:76/314 - (24%)
Similarity:121/314 - (38%) Gaps:81/314 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 YKQQQHHQQLHHHNNNNNSGSSGGSSPAHSNN-NNNINGDNCEASNVAGVGVLPSALHHPQPHPP 155
            |.....:|.|::..|...:.|...|:..||.: ..|.||             :..:::.|..   
Zfish    13 YPNGSDYQLLNYGTNGAMNASYRDSTSMHSGSFGYNYNG-------------IDLSVNRPNN--- 61

  Fly   156 THPHTHPHALMHPHGKLGHFPPTAGGNGLNVAQYAAAMQQ-HYAAAAAAAAARNNAAAAAAAAAA 219
                             |||    |..|.|...:....|: .|..::.:.::.:..:.|.:....
Zfish    62 -----------------GHF----GAVGDNSRAFQNPSQETRYRQSSCSLSSPDPLSCATSDTLE 105

  Fly   220 AAAAGVAAPPVDGGVDGGVGLAPPAGGDLDDSSDYHEENE----DCDSGNMD------------- 267
            ...   ::||.|..       .|.....|.:|::....|.    |.|..|:.             
Zfish   106 LKG---SSPPSDQS-------TPTGNSRLTNSNNLTSSNSTHFADTDETNVSSETEEGAQTTTTS 160

  Fly   268 ----DHSVCSNGGKDDDGNSV-------KSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQ 321
                ..||.::....:||.:.       |...:.||:|...|  :||||:|.:|...|||.|...
Zfish   161 RTQKQESVATSTTTPNDGQTPQIFPWMRKLHISHDMTGPDGK--RARTAYTRYQTLELEKEFHFN 223

  Fly   322 KYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNFAAFQ 375
            :||:.:.|.|:||.|.||:.|:|.|:||||.|||:...:....||.||  :|||
Zfish   224 RYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAG--SAFQ 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 28/55 (51%)
hoxb5bNP_571612.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..182 22/132 (17%)
Antp-type hexapeptide 183..188 0/4 (0%)
Homeodomain 202..258 CDD:459649 29/57 (51%)

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